Viral
Regulation of KSHV lytic switch protein expression by a virus-encoded microRNA: an evolutionary adaptation that fine-tunes lytic
reactivation.
Bellare P, Ganem D.
Cell Host Microbe. 2009 Dec 17;6(6):570-5.
Micro-RNAs: viral genome and robustness of gene expression in the host.
Demongeot J, Drouet E, Elena A, Moreira A, Rechoum Y, Sené S.
Philos Transact A Math Phys Eng Sci. 2009 Dec 13;367(1908):4941-65.
Identification of herpes simplex virus type 1 proteins encoded within the first 1.5 kb of the latency-associated transcript.
Henderson G, Jaber T, Carpenter D, Wechsler SL, Jones C.
J Neurovirol. 2009 Dec;15(5-6):439-48.
[Viral noncoding RNAs]
Iwakawa HO, Okuno T.
Uirusu. 2009 Dec;59(2):179-87.
Identification and expression analysis of infectious laryngotracheitis virus encoding microRNAs.
Rachamadugu R, Lee JY, Wooming A, Kong BW.
Virus Genes. 2009 Dec;39(3):301-8.
Role of virus-encoded microRNAs in herpesvirus biology.
Boss IW, Plaisance KB, Renne R.
Trends Microbiol. 2009 Dec;17(12):544-53.
Reticuloendotheliosis virus strain T induces miR-155, which targets JARID2 and promotes cell survival.
Bolisetty MT, Dy G, Tam W, Beemon KL.
J Virol. 2009 Dec;83(23):12009-17.
Inhibition of hepatitis B virus replication with linear DNA sequences expressing antiviral micro-RNA shuttles.
Chattopadhyay S, Ely A, Bloom K, Weinberg MS, Arbuthnot P.
Biochem Biophys Res Commun. 2009 Nov 20;389(3):484-9.
MicroRNome analysis unravels the molecular basis of SARS infection in bronchoalveolar stem cells.
Mallick B, Ghosh Z, Chakrabarti J.
PLoS One. 2009 Nov 13;4(11):e7837.
Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing
approach.
Wang Y, Brahmakshatriya V, Zhu H, Lupiani B, Reddy SM, Yoon BJ, Gunaratne PH, Kim JH, Chen R, Wang J, Zhou H.
BMC Genomics. 2009 Nov 5;10:512.
[Research progress on the regulational role of microRNA in virus infection]
Liu L, Li J, Qiao WT, Geng YQ.
Bing Du Xue Bao. 2009 Nov;25(6):485-9.
Modulation of LMP2A expression by a newly identified Epstein-Barr virus-encoded microRNA miR-BART22.
Lung RW, Tong JH, Sung YM, Leung PS, Ng DC, Chau SL, Chan AW, Ng EK, Lo KW, To KF.
Neoplasia. 2009 Nov;11(11):1174-84.
HSV-1 infection of human brain cells induces miRNA-146a and Alzheimer-type inflammatory signaling.
Hill JM, Zhao Y, Clement C, Neumann DM, Lukiw WJ.
Neuroreport. 2009 Oct 28;20(16):1500-5.
RNAi-mediated inhibition of HIV-1 by targeting partially complementary viral sequences.
Liu YP, Gruber J, Haasnoot J, Konstantinova P, Berkhout B.
Nucleic Acids Res. 2009 Oct;37(18):6194-204.
Inhibition of rabies virus replication by multiple artificial microRNAs.
Israsena N, Supavonwong P, Ratanasetyuth N, Khawplod P, Hemachudha T.
Antiviral Res. 2009 Oct;84(1):76-83.
Analysis of human cytomegalovirus-encoded microRNA activity during infection.
Stern-Ginossar N, Saleh N, Goldberg MD, Prichard M, Wolf DG, Mandelboim O.
J Virol. 2009 Oct;83(20):10684-93.
Analysis of human alphaherpesvirus microRNA expression in latently infected human trigeminal ganglia.
Umbach JL, Nagel MA, Cohrs RJ, Gilden DH, Cullen BR.
J Virol. 2009 Oct;83(20):10677-83.
Latency-associated transcript (LAT) exon 1 controls herpes simplex virus species-specific phenotypes: reactivation in the guinea pig
genital model and neuron subtype-specific latent expression of LAT.
Bertke AS, Patel A, Imai Y, Apakupakul K, Margolis TP, Krause PR.
J Virol. 2009 Oct;83(19):10007-15.
Human cellular restriction factors that target HIV-1 replication.
Strebel K, Luban J, Jeang KT.
BMC Med. 2009 Sep 16;7:48.
A structural perspective of the protein-RNA interactions involved in virus-induced RNA silencing and its suppression.
Yang J, Yuan YA.
Biochim Biophys Acta. 2009 Sep-Oct;1789(9-10):642-52.
In vitro characterization of a miR-122-sensitive double-helical switch element in the 5' region of hepatitis C virus RNA.
Díaz-Toledano R, Ariza-Mateos A, Birk A, Martínez-García B, Gómez J.
Nucleic Acids Res. 2009 Sep;37(16):5498-510.
RNA interference inhibitors of hepatitis B virus.
McCaffrey AP.
Ann N Y Acad Sci. 2009 Sep;1175:15-23.
Two small RNAs encoded within the first 1.5 kilobases of the herpes simplex virus type 1 latency-associated transcript can inhibit
productive infection and cooperate to inhibit apoptosis.
Shen W, Sa e Silva M, Jaber T, Vitvitskaia O, Li S, Henderson G, Jones C.
J Virol. 2009 Sep;83(18):9131-9.
Prediction of viral microRNA precursors based on human microRNA precursor sequence and structural features.
Kumar S, Ansari FA, Scaria V.
Virol J. 2009 Aug 20;6:129.
Fly antiviral RNA silencing and miRNA biogenesis claim ARS2.
Voinnet O.
Cell Host Microbe. 2009 Aug 20;6(2):99-101.
Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers.
Peng X, Li Y, Walters KA, Rosenzweig ER, Lederer SL, Aicher LD, Proll S, Katze MG.
BMC Genomics. 2009 Aug 11;10:373.
Virus-host interactions: from systems biology to translational research.
Peng X, Chan EY, Li Y, Diamond DL, Korth MJ, Katze MG.
Curr Opin Microbiol. 2009 Aug;12(4):432-8.
Loss of MicroRNA targets in the 3' untranslated region as a mechanism of retroviral insertional activation of growth factor independence 1.
Dabrowska MJ, Dybkaer K, Johnsen HE, Wang B, Wabl M, Pedersen FS.
J Virol. 2009 Aug;83(16):8051-61.
Investigation of the mechanism by which herpes simplex virus type 1 LAT sequences modulate preferential establishment of latent infection
in mouse trigeminal ganglia.
Imai Y, Apakupakul K, Krause PR, Halford WP, Margolis TP.
J Virol. 2009 Aug;83(16):7873-82.
Human- and virus-encoded microRNAs as potential targets of antiviral therapy.
Kurzyńska-Kokorniak A, Jackowiak P, Figlerowicz M, Figlerowicz M.
Mini Rev Med Chem. 2009 Jul;9(8):927-37.
Differential expression of microRNAs in Marek's disease virus-transformed T-lymphoma cell lines.
Yao Y, Zhao Y, Smith LP, Lawrie CH, Saunders NJ, Watson M, Nair V.
J Gen Virol. 2009 Jul;90(Pt 7):1551-9.
Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication.
Yao Y, Zhao Y, Smith LP, Watson M, Nair V.
J Virol. 2009 Jul;83(13):6969-73.
Cellular microRNA and P bodies modulate host-HIV-1 interactions.
Nathans R, Chu CY, Serquina AK, Lu CC, Cao H, Rana TM.
Mol Cell. 2009 Jun 26;34(6):696-709.
MicroRNA-mediated species-specific attenuation of influenza A virus.
Perez JT, Pham AM, Lorini MH, Chua MA, Steel J, tenOever BR.
Nat Biotechnol. 2009 Jun;27(6):572-6.
Cytomegalovirus microRNAs.
Dölken L, Pfeffer S, Koszinowski UH.
Virus Genes. 2009 Jun;38(3):355-64.
Effective inhibition of infectious bursal disease virus replication by recombinant avian adeno-associated virus-delivered microRNAs.
Wang Y, Sun H, Shen P, Zhang X, Xia X.
J Gen Virol. 2009 Jun;90(Pt 6):1417-22.
Gene expression and hepatitis C virus infection.
Asselah T, Bièche I, Sabbagh A, Bedossa P, Moreau R, Valla D, Vidaud M, Marcellin P.
Gut. 2009 Jun;58(6):846-58.
Heat-induced reactivation of HSV-1 in latent mice: upregulation in the TG of CD83 and other immune response genes and their LAT-ICP0
locus.
Clement C, Bhattacharjee PS, Kaufman HE, Hill JM.
Invest Ophthalmol Vis Sci. 2009 Jun;50(6):2855-61.
MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific.
Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC,
Green PJ, Burnside J.
Virology. 2009 May 25;388(1):128-36.
Activation of hepatitis C virus translation by a liver-specific microRNA.
Niepmann M.
Cell Cycle. 2009 May 15;8(10):1473-7.
The role of RNAi and microRNAs in animal virus replication and antiviral immunity.
Umbach JL, Cullen BR.
Genes Dev. 2009 May 15;23(10):1151-64.
Does the presence of anti-HIV miRNAs in monocytes explain their resistance to HIV-1 infection?
Swaminathan S, Zaunders J, Wilkinson J, Suzuki K, Kelleher AD.
Blood. 2009 May 14;113(20):5029-30
Human herpesvirus miRNAs statistically preferentially target host genes involved in cell signaling and adhesion/junction pathways.
Gao G, Li JT, Kong L, Tao L, Wei L.
Cell Res. 2009 May;19(5):665-7.
MicroRNAs 221 and 222 target p27Kip1 in Marek's disease virus-transformed tumour cell line MSB-1.
Lambeth LS, Yao Y, Smith LP, Zhao Y, Nair V.
J Gen Virol. 2009 May;90(Pt 5):1164-71.
Murine Polyomavirus encodes a microRNA that cleaves early RNA transcripts but is not essential for experimental infection.
Sullivan CS, Sung CK, Pack CD, Grundhoff A, Lukacher AE, Benjamin TL, Ganem D.
Virology. 2009 Apr 25;387(1):157-67.
All for one and one for all: herpesviral microRNAs close in on their prey.
Dölken L, Jonjic S.
Cell Host Microbe. 2009 Apr 23;5(4):315-7.
Diverse herpesvirus microRNAs target the stress-induced immune ligand MICB to escape recognition by natural killer cells.
Nachmani D, Stern-Ginossar N, Sarid R, Mandelboim O.
Cell Host Microbe. 2009 Apr 23;5(4):376-85.
The microRNAs of Epstein-Barr Virus are expressed at dramatically differing levels among cell lines.
Pratt ZL, Kuzembayeva M, Sengupta S, Sugden B.
Virology. 2009 Apr 10;386(2):387-97.
Variability in the level of RNA silencing suppression caused by triple gene block protein 1 (TGBp1) from various potexviruses during
infection.
Senshu H, Ozeki J, Komatsu K, Hashimoto M, Hatada K, Aoyama M, Kagiwada S, Yamaji Y, Namba S.
J Gen Virol. 2009 Apr;90(Pt 4):1014-24.
Fewer latent herpes simplex virus type 1 and cytotoxic T cells occur in the ophthalmic division than in the maxillary and mandibular divisions
of the human trigeminal ganglion and nerve.
Hüfner K, Horn A, Derfuss T, Glon C, Sinicina I, Arbusow V, Strupp M, Brandt T, Theil D.
J Virol. 2009 Apr;83(8):3696-703.
Identification of novel Epstein-Barr virus microRNA genes from nasopharyngeal carcinomas.
Zhu JY, Pfuhl T, Motsch N, Barth S, Nicholls J, Grässer F, Meister G.
J Virol. 2009 Apr;83(7):3333-41.
Discovery of herpes B virus-encoded microRNAs.
Besecker MI, Harden ME, Li G, Wang XJ, Griffiths A.
J Virol. 2009 Apr;83(7):3413-6.
Oncogenic HPV infection interrupts the expression of tumor-suppressive miR-34a through viral oncoprotein E6.
Wang X, Wang HK, McCoy JP, Banerjee NS, Rader JS, Broker TR, Meyers C, Chow LT, Zheng ZM.
RNA. 2009 Apr;15(4):637-47.
Suppression of HIV-1 replication by microRNA effectors.
Chable-Bessia C, Meziane O, Latreille D, Robinson RT, Zamborlini A, Wagschal A, Jacquet JM, Reynes J, Levy Y, Saib A, Bennasser Y,
Benkirane M.
Retrovirology. 2009 Mar 9;6:26.
Reversal of HIV-1 latency with anti-microRNA inhibitors.
Zhang H.
Int J Biochem Cell Biol. 2009 Mar;41(3):451-4.
HIV-1 genome-encoded hiv1-mir-H1 impairs cellular responses to infection.
Kaul D, Ahlawat A, Gupta SD.
Mol Cell Biochem. 2009 Mar;323(1-2):143-8.
[Marek's disease virus encoded miRNAs--an update review]
Niu BX, Teng LQ, Wei P.
Bing Du Xue Bao. 2009 Mar;25(2):154-8.
Regulation of the hepatitis C virus genome replication by miR-199a.
Murakami Y, Aly HH, Tajima A, Inoue I, Shimotohno K.
J Hepatol. 2009 Mar;50(3):453-60.
Regulation of hepatitis C virus replication by microRNAs.
Pietschmann T.
J Hepatol. 2009 Mar;50(3):441-4.
MicroRNAs and the regulation of vector tropism.
Kelly EJ, Russell SJ.
Mol Ther. 2009 Mar;17(3):409-16.
Cellular versus viral microRNAs in host-virus interaction.
Ghosh Z, Mallick B, Chakrabarti J.
Nucleic Acids Res. 2009 Mar;37(4):1035-48.
Comprehensive profiling of Epstein-Barr virus microRNAs in nasopharyngeal carcinoma.
Cosmopoulos K, Pegtel M, Hawkins J, Moffett H, Novina C, Middeldorp J, Thorley-Lawson DA.
J Virol. 2009 Mar;83(5):2357-67.
Level of herpes simplex virus type 1 latency correlates with severity of corneal scarring and exhaustion of CD8+ T cells in trigeminal ganglia
of latently infected mice.
Mott KR, Bresee CJ, Allen SJ, BenMohamed L, Wechsler SL, Ghiasi H.
J Virol. 2009 Mar;83(5):2246-54.
[Host genetic factors associated with susceptibility to HIV infection and progression of infection]
Zwolińska K.
Postepy Hig Med Dosw (Online). 2009 Feb 24;63:73-91.
HIV-1 TAR miRNA protects against apoptosis by altering cellular gene expression.
Klase Z, Winograd R, Davis J, Carpio L, Hildreth R, Heydarian M, Fu S, McCaffrey T, Meiri E, Ayash-Rashkovsky M, Gilad S, Bentwich Z,
Kashanchi F.
Retrovirology. 2009 Feb 16;6:18.
Molecular evolution of a viral non-coding sequence under the selective pressure of amiRNA-mediated silencing.
Lin SS, Wu HW, Elena SF, Chen KC, Niu QW, Yeh SD, Chen CC, Chua NH.
PLoS Pathog. 2009 Feb;5(2):e1000312.
Epstein-Barr virus BART gene expression.
Al-Mozaini M, Bodelon G, Karstegl CE, Jin B, Al-Ahdal M, Farrell PJ.
J Gen Virol. 2009 Feb;90(Pt 2):307-16.
Novel less-abundant viral microRNAs encoded by herpes simplex virus 2 latency-associated transcript and their roles in regulating ICP34.5
and ICP0 mRNAs.
Tang S, Patel A, Krause PR.
J Virol. 2009 Feb;83(3):1433-42.
Viral and cellular messenger RNA targets of viral microRNAs.
Cullen BR.
Nature. 2009 Jan 22;457(7228):421-5.
Merkel cell polyomavirus encodes a microRNA with the ability to autoregulate viral gene expression.
Seo GJ, Chen CJ, Sullivan CS.
Virology. 2009 Jan 20;383(2):183-7.
Cellular microRNA expression correlates with susceptibility of monocytes/macrophages to HIV-1 infection.
Wang X, Ye L, Hou W, Zhou Y, Wang YJ, Metzger DS, Ho WZ.
Blood. 2009 Jan 15;113(3):671-4.
Altered expression profiles of microRNAs in a stable hepatitis B virus-expressing cell line.
Liu Y, Zhao JJ, Wang CM, Li MY, Han P, Wang L, Cheng YQ, Zoulim F, Ma X, Xu DP.
Chin Med J (Engl). 2009 Jan 5;122(1):10-4.
[Role of siRNAS and miRNAS in the processes of RNA-mediated gene silencing during viral infections]
Krul'ko IV, Ust'ianenko DO, Polishchuk VP.
Tsitol Genet. 2009 Jan-Feb;43(1):78-90.
Virus-specific host miRNAs: antiviral defenses or promoters of persistent infection?
Mahajan VS, Drake A, Chen J.
Trends Immunol. 2009 Jan;30(1):1-7.
miR-198 inhibits HIV-1 gene expression and replication in monocytes and its mechanism of action appears to involve repression of cyclin
T1.
Sung TL, Rice AP.
PLoS Pathog. 2009 Jan;5(1):e1000263.
Decreased levels of microRNA miR-122 in individuals with hepatitis C responding poorly to interferon therapy.
Sarasin-Filipowicz M, Krol J, Markiewicz I, Heim MH, Filipowicz W.
Nat Med. 2009 Jan;15(1):31-3.
The M type K15 protein of Kaposi's sarcoma-associated herpesvirus regulates microRNA expression via its SH2-binding motif to induce
cell migration and invasion.
Tsai YH, Wu MF, Wu YH, Chang SJ, Lin SF, Sharp TV, Wang HW.
J Virol. 2009 Jan;83(2):622-32.
Tandem array-based expression screens identify host mRNA targets of virus-encoded microRNAs.
Ziegelbauer JM, Sullivan CS, Ganem D.
Nat Genet. 2009 Jan;41(1):130-4.
Searching for targets of viral microRNAs.
Whitby D.
Nat Genet. 2009 Jan;41(1):7-8.
A functional MicroRNA-155 ortholog encoded by the oncogenic Marek's disease virus.
Zhao Y, Yao Y, Xu H, Lambeth L, Smith LP, Kgosana L, Wang X, Nair V.
J Virol. 2009 Jan;83(1):489-92.
Posttranscriptional gene regulation in Kaposi's sarcoma-associated herpesvirus.
Conrad NK.
Adv Appl Microbiol. 2009;68:241-61.
Emergence of a complex relationship between HIV-1 and the microRNA pathway.
Ouellet DL, Plante I, Barat C, Tremblay MJ, Provost P.
Methods Mol Biol. 2009;487:415-33.