Viral
Small RNAs and large DNA viruses.
Nelson JA.
N Engl J Med. 2007 Dec 20;357(25):2630-2.
A viral microRNA functions as an orthologue of cellular miR-155.
Gottwein E, Mukherjee N, Sachse C, Frenzel C, Majoros WH, Chi JT, Braich R, Manoharan M, Soutschek J, Ohler U, Cullen BR.
Nature. 2007 Dec 13;450(7172):1096-9.
Host-virus genome interactions: macro roles for microRNAs.
Scaria V, Hariharan M, Pillai B, Maiti S, Brahmachari SK.
Cell Microbiol. 2007 Dec;9(12):2784-94.
Discrete clusters of virus-encoded micrornas are associated with complementary strands of the genome and the 7.2-kilobase stable intron
in murine cytomegalovirus.
Buck AH, Santoyo-Lopez J, Robertson KA, Kumar DS, Reczko M, Ghazal P.
J Virol. 2007 Dec;81(24):13761-70.
Mouse cytomegalovirus microRNAs dominate the cellular small RNA profile during lytic infection and show features of posttranscriptional
regulation.
Dölken L, Perot J, Cognat V, Alioua A, John M, Soutschek J, Ruzsics Z, Koszinowski U, Voinnet O, Pfeffer S.
J Virol. 2007 Dec;81(24):13771-82.
Kaposi's sarcoma-associated herpesvirus encodes an ortholog of miR-155.
Skalsky RL, Samols MA, Plaisance KB, Boss IW, Riva A, Lopez MC, Baker HV, Renne R.
J Virol. 2007 Dec;81(23):12836-45.
The conserved FRNK box in HC-Pro, a plant viral suppressor of gene silencing, is required for small RNA binding and mediates symptom
development.
Shiboleth YM, Haronsky E, Leibman D, Arazi T, Wassenegger M, Whitham SA, Gaba V, Gal-On A.
J Virol. 2007 Dec;81(23):13135-48.
Epstein-Barr virus-encoded latent membrane protein 1 (LMP1) induces the expression of the cellular microRNA miR-146a.
Motsch N, Pfuhl T, Mrazek J, Barth S, Grässer FA.
RNA Biol. 2007 Nov;4(3):131-7.
A human cytomegalovirus-encoded microRNA regulates expression of multiple viral genes involved in replication.
Grey F, Meyers H, White EA, Spector DH, Nelson J.
PLoS Pathog. 2007 Nov;3(11):e163.
Analysis of the interaction of primate retroviruses with the human RNA interference machinery.
Lin J, Cullen BR.
J Virol. 2007 Nov;81(22):12218-26.
The p122 subunit of Tobacco Mosaic Virus replicase is a potent silencing suppressor and compromises both small interfering RNA- and
microRNA-mediated pathways.
Csorba T, Bovi A, Dalmay T, Burgyán J.
J Virol. 2007 Nov;81(21):11768-80.
Interferon modulation of cellular microRNAs as an antiviral mechanism.
Pedersen IM, Cheng G, Wieland S, Volinia S, Croce CM, Chisari FV, David M.
Nature. 2007 Oct 18;449(7164):919-22.
Small non-coding RNAs, mammalian cells, and viruses: regulatory interactions?
Yeung ML, Benkirane M, Jeang KT.
Retrovirology. 2007 Oct 15;4:74.
Modulation of LMP1 protein expression by EBV-encoded microRNAs.
Lo AK, To KF, Lo KW, Lung RW, Hui JW, Liao G, Hayward SD.
Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16164-9.
Computational analysis of microRNA-mediated antiviral defense in humans.
Watanabe Y, Kishi A, Yachie N, Kanai A, Tomita M.
FEBS Lett. 2007 Oct 2;581(24):4603-10.
Cellular AATF gene: armour against HIV-1.
Kaul D.
Indian J Biochem Biophys. 2007 Oct;44(5):276-8.
Cellular microRNAs contribute to HIV-1 latency in resting primary CD4+ T lymphocytes.
Huang J, Wang F, Argyris E, Chen K, Liang Z, Tian H, Huang W, Squires K, Verlinghieri G, Zhang H.
Nat Med. 2007 Oct;13(10):1241-7.
Keeping quiet: microRNAs in HIV-1 latency.
Han Y, Siliciano RF.
Nat Med. 2007 Oct;13(10):1138-40.
Reciprocal effects of micro-RNA-122 on expression of heme oxygenase-1 and hepatitis C virus genes in human hepatocytes.
Shan Y, Zheng J, Lambrecht RW, Bonkovsky HL.
Gastroenterology. 2007 Oct;133(4):1166-74.
RISCy business: MicroRNAs, pathogenesis, and viruses.
Berkhout B, Jeang KT.
J Biol Chem. 2007 Sep 14;282(37):26641-5.
Epstein-Barr virus BHRF1 micro- and stable RNAs during latency III and after induction of replication.
Xing L, Kieff E.
J Virol. 2007 Sep;81(18):9967-75.
Binding of tobamovirus replication protein with small RNA duplexes.
Kurihara Y, Inaba N, Kutsuna N, Takeda A, Tagami Y, Watanabe Y.
J Gen Virol. 2007 Aug;88(Pt 8):2347-52.
Cellular cofactors affecting hepatitis C virus infection and replication.
Randall G, Panis M, Cooper JD, Tellinghuisen TL, Sukhodolets KE, Pfeffer S, Landthaler M, Landgraf P, Kan S, Lindenbach BD, Chien M,
Weir DB, Russo JJ, Ju J, Brownstein MJ, Sheridan R, Sander C, Zavolan M, Tuschl T, Rice CM.
Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12884-9.
HIV-1 TAR element is processed by Dicer to yield a viral micro-RNA involved in chromatin remodeling of the viral LTR.
Klase Z, Kale P, Winograd R, Gupta MV, Heydarian M, Berro R, McCaffrey T, Kashanchi F.
BMC Mol Biol. 2007 Jul 30;8:63.
Host immune system gene targeting by a viral miRNA.
Stern-Ginossar N, Elefant N, Zimmermann A, Wolf DG, Saleh N, Biton M, Horwitz E, Prokocimer Z, Prichard M, Hahn G, Goldman-Wohl D,
Greenfield C, Yagel S, Hengel H, Altuvia Y, Margalit H, Mandelboim O.
Science. 2007 Jul 20;317(5836):376-81.
Cloning and analysis of microRNAs encoded by the primate gamma-herpesvirus rhesus monkey rhadinovirus.
Schafer A, Cai X, Bilello JP, Desrosiers RC, Cullen BR.
Virology. 2007 Jul 20;364(1):21-7.
Marek's disease virus type 2 (MDV-2)-encoded microRNAs show no sequence conservation with those encoded by MDV-1.
Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Sewer A, Zavolan M, Nair V.
J Virol. 2007 Jul;81(13):7164-70.
Dicing with viruses: microRNAs as antiviral factors.
Muller S, Imler JL.
Immunity. 2007 Jul;27(1):1-3.
The NS3 protein of Rice hoja blanca tenuivirus suppresses RNA silencing in plant and insect hosts by efficiently binding both siRNAs and
miRNAs.
Hemmes H, Lakatos L, Goldbach R, Burgyan J, Prins M.
RNA. 2007 Jul;13(7):1079-89.
[Interplay between HIV-1 replication and the microRNA-silencing pathway]
Triboulet R, Benkirane M.
Med Sci (Paris). 2007 Jun-Jul;23(6-7):590-2.
Identification of cellular genes targeted by KSHV-encoded microRNAs.
Samols MA, Skalsky RL, Maldonado AM, Riva A, Lopez MC, Baker HV, Renne R.
PLoS Pathog. 2007 May 11;3(5):e65.
Overcoming HIV-1 resistance to RNA interference.
Boden D, Pusch O, Ramratnam B.
Front Biosci. 2007 May 1;12:3104-16.
Small interfering RNAs against the TAR RNA binding protein, TRBP, a Dicer cofactor, inhibit human immunodeficiency virus type 1 long
terminal repeat expression and viral production.
Christensen HS, Daher A, Soye KJ, Frankel LB, Alexander MR, Laine S, Bannwarth S, Ong CL, Chung SW, Campbell SM, Purcell DF,
Gatignol A.
J Virol. 2007 May;81(10):5121-31.
[Virus and RNA silencing]
Okuno T, Takeda A.
Tanpakushitsu Kakusan Koso. 2007 May;52(6 Suppl):692-7.
The silent defense: micro-RNA directed defense against HIV-1 replication.
Kumar A.
Retrovirology. 2007 Apr 12;4:26.
Characterizing viral microRNAs and its application on identifying new microRNAs in viruses.
Pan X, Zhang B, San Francisco M, Cobb GP.
J Cell Physiol. 2007 Apr;211(1):10-8.
Molecular bases of viral RNA targeting by viral small interfering RNA-programmed RISC.
Pantaleo V, Szittya G, Burgyan J.
J Virol. 2007 Apr;81(8):3797-806.
HBV-encoded microRNA candidate and its target.
Jin WB, Wu FL, Kong D, Guo AG.
Comput Biol Chem. 2007 Apr;31(2):124-6.
MicroRNAs in viral replication and pathogenesis.
Dykxhoorn DM.
DNA Cell Biol. 2007 Apr;26(4):239-49.
Suppression of microRNA-silencing pathway by HIV-1 during virus replication.
Triboulet R, Mari B, Lin YL, Chable-Bessia C, Bennasser Y, Lebrigand K, Cardinaud B, Maurin T, Barbry P, Baillat V, Reynes J, Corbeau
P, Jeang KT, Benkirane M.
Science. 2007 Mar 16;315(5818):1579-82.
Conservation of virally encoded microRNAs in Kaposi sarcoma--associated herpesvirus in primary effusion lymphoma cell lines and in
patients with Kaposi sarcoma or multicentric Castleman disease.
Marshall V, Parks T, Bagni R, Wang CD, Samols MA, Hu J, Wyvil KM, Aleman K, Little RF, Yarchoan R, Renne R, Whitby D.
J Infect Dis. 2007 Mar 1;195(5):645-59.
High conservation of Kaposi sarcoma--associated herpesvirus microRNAs implies important function.
Sullivan CS.
J Infect Dis. 2007 Mar 1;195(5):618-20.
Expression of viral microRNAs in Epstein-Barr virus-associated gastric carcinoma.
Kim do N, Chae HS, Oh ST, Kang JH, Park CH, Park WS, Takada K, Lee JM, Lee WK, Lee SK.
J Virol. 2007 Jan;81(2):1033-6.
Identification of viral microRNAs.
Sullivan CS, Grundhoff A.
Methods Enzymol. 2007;427:3-23.
Identification of virally encoded microRNAs.
Pfeffer S.
Methods Enzymol. 2007;427:51-63.
Protocols for expression and functional analysis of viral microRNAs.
Gottwein E, Cullen BR.
Methods Enzymol. 2007;427:229-43.
Genomics and Marek's disease virus.
Burnside J, Morgan RW.
Cytogenet Genome Res. 2007;117(1-4):376-87.
RNA interference and HIV-1.
Yeung ML, Bennasser Y, Le SY, Jeang KT.
Adv Pharmacol. 2007;55:427-38.