Stem Cells
Tracheobronchial transplantation with a stem-cell-seeded bioartificial nanocomposite: a proof-of-concept study.
Jungebluth P, Alici E, Baiguera S, Le Blanc K, Blomberg P, Bozóky B, Crowley C, Einarsson O, Grinnemo KH, Gudbjartsson T, Le
Guyader S, Henriksson G, Hermanson O, Juto JE, Leidner B, Lilja T, Liska J, Luedde T, Lundin V, Moll G, Nilsson B, Roderburg C,
Strömblad S, Sutlu T, Teixeira AI, Watz E, Seifalian A, Macchiarini P.
Lancet. 2011 Dec 10;378(9808):1997-2004.
Synergy of microRNA and stem cell: a novel therapeutic approach for diabetes mellitus and cardiovascular diseases.
Tyagi AC, Sen U, Mishra PK.
Curr Diabetes Rev. 2011 Nov 1;7(6):367-76.
Drosha regulates hMSCs cell cycle progression through a miRNA independent mechanism.
Oskowitz AZ, Penfornis P, Tucker A, Prockop DJ, Pochampally R.
Int J Biochem Cell Biol. 2011 Nov;43(11):1563-72.
miR-34 miRNAs provide a barrier for somatic cell reprogramming.
Choi YJ, Lin CP, Ho JJ, He X, Okada N, Bu P, Zhong Y, Kim SY, Bennett MJ, Chen C, Ozturk A, Hicks GG, Hannon GJ, He L.
Nat Cell Biol. 2011 Oct 23;13(11):1353-60.
Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.
Lipchina I, Elkabetz Y, Hafner M, Sheridan R, Mihailovic A, Tuschl T, Sander C, Studer L, Betel D.
Genes Dev. 2011 Oct 15;25(20):2173-86.
Induced pluripotent stem cells: emerging techniques for nuclear reprogramming.
Han JW, Yoon YS.
Antioxid Redox Signal. 2011 Oct 1;15(7):1799-820.
Argonaute-2-null embryonic stem cells are retarded in self-renewal and differentiation.
Shekar PC, Naim A, Sarathi DP, Kumar S.
J Biosci. 2011 Sep;36(4):649-57.
miR-203 modulates epithelial differentiation of human embryonic stem cells towards epidermal stratification.
Nissan X, Denis JA, Saidani M, Lemaitre G, Peschanski M, Baldeschi C.
Dev Biol. 2011 Aug 15;356(2):506-15.
MicroRNA-21 regulates the self-renewal of mouse spermatogonial stem cells.
Niu Z, Goodyear SM, Rao S, Wu X, Tobias JW, Avarbock MR, Brinster RL.
Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12740-5.
[DNA polymerase delta-interacting protein 38 is a target gene of microRNA-291a-5p].
Lin D, Lin L.
Sheng Wu Gong Cheng Xue Bao. 2010 Aug;26(8):1095-101.
Proteomic comparison of human embryonic stem cells with their differentiated fibroblasts: Identification of 206 genes targeted by hES
cell-specific microRNAs.
Tsai ZY, Chou CH, Lu CY, Singh S, Yu SL, Li SS.
Kaohsiung J Med Sci. 2011 Aug;27(8):299-306.
microRNAs modulate iPS cell generation.
Yang CS, Li Z, Rana TM.
RNA. 2011 Aug;17(8):1451-60.
iPSCs: Unstable origins?
Mukherjee S, Thrasher AJ.
Mol Ther. 2011 Jul;19(7):1188-90.
mTOR and the differentiation of mesenchymal stem cells.
Xiang X, Zhao J, Xu G, Li Y, Zhang W.
Acta Biochim Biophys Sin (Shanghai). 2011 Jul;43(7):501-10.
The stem cell niche: lessons from the Drosophila testis.
de Cuevas M, Matunis EL.
Development. 2011 Jul;138(14):2861-9.
MicroRNAs and reprogramming.
Chang HM, Gregory RI.
Nat Biotechnol. 2011 Jun 7;29(6):499-500.
Regulatory circuitries coordinated by transcription factors and microRNAs at the cornerstone of hematopoietic stem cell self-renewal and
differentiation.
Starnes LM, Sorrentino A.
Curr Stem Cell Res Ther. 2011 Jun 2;6(2):142-61.
MicroRNAs and their roles in mammalian stem cells.
Yi R, Fuchs E.
J Cell Sci. 2011 Jun 1;124(Pt 11):1775-83.
Messenger RNA and microRNA profiling during early mouse EB formation.
Tripathi R, Saini HK, Rad R, Abreu-Goodger C, van Dongen S, Enright AJ.
Gene Expr Patterns. 2011 Jun-Jul;11(5-6):334-44.
miR-335 orchestrates cell proliferation, migration and differentiation in human mesenchymal stem cells.
Tomé M, López-Romero P, Albo C, Sepúlveda JC, Fernández-Gutiérrez B, Dopazo A, Bernad A, González MA.
Cell Death Differ. 2011 Jun;18(6):985-95.
IL-4 induces differentiation of human embryonic stem cells into fibrogenic fibroblast-like cells.
Sato T, Liu X, Basma H, Togo S, Sugiura H, Nelson A, Nakanishi M, Kanaji N, Wang X, Kim M, Li Y, Michalski J, Farid M, Sharp JG,
Rennard SI.
J Allergy Clin Immunol. 2011 Jun;127(6):1595-603.e9.
The role of microRNAs in self-renewal and differentiation of mesenchymal stem cells.
Guo L, Zhao RC, Wu Y.
Exp Hematol. 2011 Jun;39(6):608-16.
MicroRNA profiling of rhesus macaque embryonic stem cells.
Sun Z, Wei Q, Zhang Y, He X, Ji W, Su B.
BMC Genomics. 2011 May 31;12(1):276.
MicroRNA cluster 302-367 enhances somatic cell reprogramming by accelerating a mesenchymal-to-epithelial transition.
Liao B, Bao X, Liu L, Feng S, Zovoilis A, Liu W, Xue Y, Cai J, Guo X, Qin B, Zhang R, Wu J, Lai L, Teng M, Niu L, Zhang B, Esteban MA,
Pei D.
J Biol Chem. 2011 May 13;286(19):17359-64.
DNA methyltransferase controls stem cell aging by regulating BMI1 and EZH2 through microRNAs.
So AY, Jung JW, Lee S, Kim HS, Kang KS.
PLoS One. 2011 May 10;6(5):e19503.
MicroRNA expression profile during adipogenic differentiation in mouse embryonic stem cells.
Knelangen JM, van der Hoek MB, Kong WC, Owens JA, Fischer B, Santos AN.
Physiol Genomics. 2011 May 1;43(10):611-20.
Combined characterization of microRNA and mRNA profiles delineates early differentiation pathways of CD133+ and CD34+
hematopoietic stem and progenitor cells.
Bissels U, Wild S, Tomiuk S, Hafner M, Scheel H, Mihailovic A, Choi YH, Tuschl T, Bosio A.
Stem Cells. 2011 May;29(5):847-57.
Snail and the microRNA-200 family act in opposition to regulate epithelial-to-mesenchymal transition and germ layer fate restriction in
differentiating ESCs.
Gill JG, Langer EM, Lindsley RC, Cai M, Murphy TL, Kyba M, Murphy KM.
Stem Cells. 2011 May;29(5):764-76.
A latent pro-survival function for the mir-290-295 cluster in mouse embryonic stem cells.
Zheng GX, Ravi A, Calabrese JM, Medeiros LA, Kirak O, Dennis LM, Jaenisch R, Burge CB, Sharp PA.
PLoS Genet. 2011 May;7(5):e1002054.
Multiple targets of miR-302 and miR-372 promote reprogramming of human fibroblasts to induced pluripotent stem cells.
Subramanyam D, Lamouille S, Judson RL, Liu JY, Bucay N, Derynck R, Blelloch R.
Nat Biotechnol. 2011 May;29(5):443-8.
MicroRNA programs in normal and aberrant stem and progenitor cells.
Arnold CP, Tan R, Zhou B, Yue SB, Schaffert S, Biggs JR, Doyonnas R, Lo MC, Perry JM, Renault VM, Sacco A, Somervaille T, Viatour P,
Brunet A, Cleary ML, Li L, Sage J, Zhang DE, Blau HM, Chen C, Chen CZ.
Genome Res. 2011 May;21(5):798-810.
p53 Spreads out further: suppression of EMT and stemness by activating miR-200c expression.
Schubert J, Brabletz T.
Cell Res. 2011 May;21(5):705-7.
Regulation of skeletal muscle stem cells through epigenetic mechanisms.
Sousa-Victor P, Muñoz-Cánoves P, Perdiguero E.
Toxicol Mech Methods. 2011 May;21(4):334-42.
Identification of a novel epigenetic regulatory region within the pluripotency associated microRNA cluster, EEmiRC.
Tata PR, Tata NR, Kühl M, Sirbu IO.
Nucleic Acids Res. 2011 May;39(9):3574-81.
The transcriptional and signalling networks of pluripotency.
Ng HH, Surani MA.
Nat Cell Biol. 2011 May;13(5):490-6.
The Nodal inhibitor Lefty is negatively modulated by the microRNA miR-302 in human embryonic stem cells.
Barroso-delJesus A, Lucena-Aguilar G, Sanchez L, Ligero G, Gutierrez-Aranda I, Menendez P.
FASEB J. 2011 May;25(5):1497-508.
MicroRNA-138 regulates osteogenic differentiation of human stromal (mesenchymal) stem cells in vivo.
Eskildsen T, Taipaleenmäki H, Stenvang J, Abdallah BM, Ditzel N, Nossent AY, Bak M, Kauppinen S, Kassem M.
Proc Natl Acad Sci U S A. 2011 Apr 12;108(15):6139-44.
Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency.
Anokye-Danso F, Trivedi CM, Juhr D, Gupta M, Cui Z, Tian Y, Zhang Y, Yang W, Gruber PJ, Epstein JA, Morrisey EE.
Cell Stem Cell. 2011 Apr 8;8(4):376-88.
Advancements in reprogramming strategies for the generation of induced pluripotent stem cells.
Lai MI, Wendy-Yeo WY, Ramasamy R, Nordin N, Rosli R, Veerakumarasivam A, Abdullah S.
J Assist Reprod Genet. 2011 Apr;28(4):291-301.
Smad-interacting protein-1 and microRNA 200 family define a nitric oxide-dependent molecular circuitry involved in embryonic stem cell
mesendoderm differentiation.
Rosati J, Spallotta F, Nanni S, Grasselli A, Antonini A, Vincenti S, Presutti C, Colussi C, D'Angelo C, Biroccio A, Farsetti A, Capogrossi
MC, Illi B, Gaetano C.
Arterioscler Thromb Vasc Biol. 2011 Apr;31(4):898-907.
Specific microRNAs are preferentially expressed by skin stem cells to balance self-renewal and early lineage commitment.
Zhang L, Stokes N, Polak L, Fuchs E.
Cell Stem Cell. 2011 Mar 4;8(3):294-308.
Small RNA-mediated regulation of iPS cell generation.
Li Z, Yang CS, Nakashima K, Rana TM.
EMBO J. 2011 Mar 2;30(5):823-34.
iPS cells generated without c-Myc have active Dlk1-Dio3 region and are capable of producing full-term mice through tetraploid
complementation.
Li W, Zhao XY, Wan HF, Zhang Y, Liu L, Lv Z, Wang XJ, Wang L, Zhou Q.
Cell Res. 2011 Mar;21(3):550-3.
Oct4 regulates the miR-302 cluster in P19 mouse embryonic carcinoma cells.
Liu H, Deng S, Zhao Z, Zhang H, Xiao J, Song W, Gao F, Guan Y.
Mol Biol Rep. 2011 Mar;38(3):2155-60.
Regulated expression of microRNAs-126/126* inhibits erythropoiesis from human embryonic stem cells.
Huang X, Gschweng E, Van Handel B, Cheng D, Mikkola HK, Witte ON.
Blood. 2011 Feb 17;117(7):2157-65.
Myc orchestrates a regulatory network required for the establishment and maintenance of pluripotency.
Smith KN, Lim JM, Wells L, Dalton S.
Cell Cycle. 2011 Feb 15;10(4):592-7.
Age-related changes in mesenchymal stem cells derived from rhesus macaque bone marrow.
Yu JM, Wu X, Gimble JM, Guan X, Freitas MA, Bunnell BA.
Aging Cell. 2011 Feb;10(1):66-79.
MicroRNA hsa-miR-138 inhibits adipogenic differentiation of human adipose tissue-derived mesenchymal stem cells through adenovirus
EID-1.
Yang Z, Bian C, Zhou H, Huang S, Wang S, Liao L, Zhao RC.
Stem Cells Dev. 2011 Feb;20(2):259-67.
Regulation of somatic cell reprogramming through inducible mir-302 expression.
Lin SL, Chang DC, Lin CH, Ying SY, Leu D, Wu DT.
Nucleic Acids Res. 2011 Feb;39(3):1054-65.
A regulatory circuitry comprised of miR-302 and the transcription factors OCT4 and NR2F2 regulates human embryonic stem cell
differentiation.
Rosa A, Brivanlou AH.
EMBO J. 2011 Jan 19;30(2):237-48.
Ibandronate promotes osteogenic differentiation of periodontal ligament stem cells by regulating the expression of microRNAs.
Zhou Q, Zhao ZN, Cheng JT, Zhang B, Xu J, Huang F, Zhao RN, Chen YJ.
Biochem Biophys Res Commun. 2011 Jan 7;404(1):127-32.
Combined mRNA and microRNA profiling reveals that miR-148a and miR-20b control human mesenchymal stem cell phenotype via
EPAS1.
Giraud-Triboult K, Rochon-Beaucourt C, Nissan X, Champon B, Aubert S, Piétu G.
Physiol Genomics. 2011 Jan 1;43(2):77-86.
The microRNA expression profiles of mouse mesenchymal stem cell during chondrogenic differentiation.
Yang B, Guo H, Zhang Y, Dong S, Ying D.
BMB Rep. 2011 Jan;44(1):28-33.
The miR-290-295 cluster promotes pluripotency maintenance by regulating cell cycle phase distribution in mouse embryonic stem cells.
Lichner Z, Páll E, Kerekes A, Pállinger E, Maraghechi P, Bosze Z, Gócza E.
Differentiation. 2011 Jan;81(1):11-24.
Histone deacetylase regulates high mobility group A2-targeting microRNAs in human cord blood-derived multipotent stem cell aging.
Lee S, Jung JW, Park SB, Roh K, Lee SY, Kim JH, Kang SK, Kang KS.
Cell Mol Life Sci. 2011 Jan;68(2):325-36.
Efficient non-viral reprogramming of myoblasts to stemness with a single small molecule to generate cardiac progenitor cells.
Pasha Z, Haider HKh, Ashraf M.
PLoS One. 2011;6(8):e23667.
Differential genomic imprinting and expression of imprinted microRNAs in testes-derived male germ-line stem cells in mouse.
Shin JY, Gupta MK, Jung YH, Uhm SJ, Lee HT.
PLoS One. 2011;6(7):e22481.
Cell cycle regulation by microRNAs in stem cells.
Wang Y, Blelloch R.
Results Probl Cell Differ. 2011;53:459-72.
Induced pluripotent stem (iPS) cell research overview.
Liu SP, Fu RH, Huang YC, Chen SY, Chien YJ, Hsu CY, Tsai CH, Shyu WC, Lin SZ.
Cell Transplant. 2011;20(1):15-9.
Methods for analyzing microRNA expression and function during osteogenic differentiation of human adipose tissue-derived mesenchymal
stem cells.
Kim YJ, Jung JS.
Methods Mol Biol. 2011;702:401-18.
Manipulations of microRNA in human pluripotent stem cells and their derivatives.
Rushing SN, Herren AW, Lieu DK, Li RA.
Methods Mol Biol. 2011;690:107-20.
Identification of microRNAs regulating reprogramming factor LIN28 in embryonic stem cells and cancer cells.
Zhong X, Li N, Liang S, Huang Q, Coukos G, Zhang L.
J Biol Chem. 2010 Dec 31;285(53):41961-71.
MicroRNAs in embryonic stem cell function and fate.
Tiscornia G, Izpisúa Belmonte JC.
Genes Dev. 2010 Dec 15;24(24):2732-41.
MicroRNA profiling reveals two distinct p53-related human pluripotent stem cell states.
Neveu P, Kye MJ, Qi S, Buchholz DE, Clegg DO, Sahin M, Park IH, Kim KS, Daley GQ, Kornblum HI, Shraiman BI, Kosik KS.
Cell Stem Cell. 2010 Dec 3;7(6):671-81.
miR-130b Promotes CD133(+) liver tumor-initiating cell growth and self-renewal via tumor protein 53-induced nuclear protein 1.
Ma S, Tang KH, Chan YP, Lee TK, Kwan PS, Castilho A, Ng I, Man K, Wong N, To KF, Zheng BJ, Lai PB, Lo CM, Chan KW, Guan XY.
Cell Stem Cell. 2010 Dec 3;7(6):694-707.
Toward a complete in silico, multi-layered embryonic stem cell regulatory network.
Xu H, Schaniel C, Lemischka IR, Ma'ayan A.
Wiley Interdiscip Rev Syst Biol Med. 2010 Nov-Dec;2(6):708-33.
Embryonic stem cell-related miRNAs are involved in differentiation of pluripotent cells originating from the germ line.
Zovoilis A, Pantazi A, Smorag L, Opitz L, Riester GS, Wolf M, Zechner U, Holubowska A, Stewart CL, Engel W.
Mol Hum Reprod. 2010 Nov;16(11):793-803.
MicroRNA signature in testes-derived male germ-line stem cells.
Jung YH, Gupta MK, Shin JY, Uhm SJ, Lee HT.
Mol Hum Reprod. 2010 Nov;16(11):804-10.
Lentiviral labeling reveals three germ layer differentiation potential of a single unrestricted somatic stem cell from human cord blood.
Wernet P, Trapp T, Zweigerdt R, Mann J, Trompeter HI.
Exp Hematol. 2010 Nov;38(11):1099-104.
Genome-wide identification of targets and function of individual MicroRNAs in mouse embryonic stem cells.
Hanina SA, Mifsud W, Down TA, Hayashi K, O'Carroll D, Lao K, Miska EA, Surani MA.
PLoS Genet. 2010 Oct 21;6(10):e1001163.
miRNA activity directs stem cell commitment to a particular fate.
Hornstein E.
Cell Cycle. 2010 Oct 15;9(20):4041-2.
A feeder-free culture using autogeneic conditioned medium for undifferentiated growth of human embryonic stem cells: comparative
expression profiles of mRNAs, microRNAs and proteins among different feeders and conditioned media.
Tsai ZY, Singh S, Yu SL, Chou CH, Li SS.
BMC Cell Biol. 2010 Oct 12;11:76.
Epithelial plasticity, stemness and pluripotency.
Ocaña OH, Nieto MA.
Cell Res. 2010 Oct;20(10):1086-8.
Diazoxide potentiates mesenchymal stem cell survival via NF-kappaB-dependent miR-146a expression by targeting Fas.
Suzuki Y, Kim HW, Ashraf M, Haider HKh.
Am J Physiol Heart Circ Physiol. 2010 Oct;299(4):H1077-82.
Disabled-2 is required for mesoderm differentiation of murine embryonic stem cells.
Huang CL, Cheng JC, Kitajima K, Nakano T, Yeh CF, Chong KY, Tseng CP.
J Cell Physiol. 2010 Oct;225(1):92-105.
Regulation of p53 in embryonic stem cells.
Solozobova V, Blattner C.
Exp Cell Res. 2010 Sep 10;316(15):2434-46.
Myc represses primitive endoderm differentiation in pluripotent stem cells.
Smith KN, Singh AM, Dalton S.
Cell Stem Cell. 2010 Sep 3;7(3):343-54.
MicroRNAs in human embryonic and cancer stem cells.
Navarro A, Monzo M.
Yonsei Med J. 2010 Sep 1;51(5):622-32.
A microRNA regulating adult hematopoietic stem cells.
Guo S, Scadden DT.
Cell Cycle. 2010 Sep;9(18):3637-8.
A role for miR-33 in p53 regulation: New perspectives for hematopoietic stem cell research.
Fuster JJ, Andrés V.
Cell Cycle. 2010 Sep;9(17):3397-8.
The mechanism of stem cell differentiation into smooth muscle cells.
Xiao Q, Wang G, Luo Z, Xu Q.
Thromb Haemost. 2010 Sep;104(3):440-8.
miR-124a is important for migratory cell fate transition during gastrulation of human embryonic stem cells.
Lee MR, Kim JS, Kim KS.
Stem Cells. 2010 Sep;28(9):1550-9.
miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells.
Tarantino C, Paolella G, Cozzuto L, Minopoli G, Pastore L, Parisi S, Russo T.
FASEB J. 2010 Sep;24(9):3255-63.
Induction of pluripotency in human cord blood unrestricted somatic stem cells.
Zaehres H, Kögler G, Arauzo-Bravo MJ, Bleidissel M, Santourlidis S, Weinhold S, Greber B, Kim JB, Buchheiser A, Liedtke S, Eilken HM,
Graffmann N, Zhao X, Meyer J, Reinhardt P, Burr B, Waclawczyk S, Ortmeier C, Uhrberg M, Schöler HR, Cantz T, Wernet P.
Exp Hematol. 2010 Sep;38(9):809-18, 818.e1-2.
miR-33-mediated downregulation of p53 controls hematopoietic stem cell self-renewal.
Herrera-Merchan A, Cerrato C, Luengo G, Dominguez O, Piris MA, Serrano M, Gonzalez S.
Cell Cycle. 2010 Aug 15;9(16):3277-85.
Stem cell pluripotency: alternative modes of transcription regulation.
Salomonis N, Conklin BR.
Cell Cycle. 2010 Aug 15;9(16):3133-4.
MicroRNA miR-125a controls hematopoietic stem cell number.
Guo S, Lu J, Schlanger R, Zhang H, Wang JY, Fox MC, Purton LE, Fleming HH, Cobb B, Merkenschlager M, Golub TR, Scadden DT.
Proc Natl Acad Sci U S A. 2010 Aug 10;107(32):14229-34.
Emerging roles of microRNAs in the control of embryonic stem cells and the generation of induced pluripotent stem cells.
Mallanna SK, Rizzino A.
Dev Biol. 2010 Aug 1;344(1):16-25.
Live cell monitoring of hiPSC generation and differentiation using differential expression of endogenous microRNAs.
Kamata M, Liang M, Liu S, Nagaoka Y, Chen IS.
PLoS One. 2010 Jul 28;5(7):e11834.
MicroRNA gene regulatory pathways in the establishment and maintenance of ESC identity.
Martinez NJ, Gregory RI.
Cell Stem Cell. 2010 Jul 2;7(1):31-5.
miRNAs regulate SIRT1 expression during mouse embryonic stem cell differentiation and in adult mouse tissues.
Saunders LR, Sharma AD, Tawney J, Nakagawa M, Okita K, Yamanaka S, Willenbring H, Verdin E.
Aging (Albany NY). 2010 Jul;2(7):415-31.
Dicer ablation impairs prostate stem cell activity and causes prostate atrophy.
Zhang L, Zhang B, Valdez JM, Wang F, Ittmann M, Xin L.
Stem Cells. 2010 Jul;28(7):1260-9.
miRNA in pluripotent stem cells.
Lakshmipathy U, Davila J, Hart RP.
Regen Med. 2010 Jul;5(4):545-55.
Characterization of microRNAs involved in embryonic stem cell states.
Stadler B, Ivanovska I, Mehta K, Song S, Nelson A, Tan Y, Mathieu J, Darby C, Blau CA, Ware C, Peters G, Miller DG, Shen L, Cleary MA,
Ruohola-Baker H.
Stem Cells Dev. 2010 Jul;19(7):935-50.
Activation of the imprinted Dlk1-Dio3 region correlates with pluripotency levels of mouse stem cells.
Liu L, Luo GZ, Yang W, Zhao X, Zheng Q, Lv Z, Li W, Wu HJ, Wang L, Wang XJ, Zhou Q.
J Biol Chem. 2010 Jun 18;285(25):19483-90.
Expression of the Argonaute protein PiwiL2 and piRNAs in adult mouse mesenchymal stem cells.
Wu Q, Ma Q, Shehadeh LA, Wilson A, Xia L, Yu H, Webster KA.
Biochem Biophys Res Commun. 2010 Jun 11;396(4):915-20.
Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation.
Salomonis N, Schlieve CR, Pereira L, Wahlquist C, Colas A, Zambon AC, Vranizan K, Spindler MJ, Pico AR, Cline MS, Clark TA,
Williams A, Blume JE, Samal E, Mercola M, Merrill BJ, Conklin BR.
Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10514-9.
Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells.
Stadtfeld M, Apostolou E, Akutsu H, Fukuda A, Follett P, Natesan S, Kono T, Shioda T, Hochedlinger K.
Nature. 2010 May 13;465(7295):175-81.
Tracing the derivation of embryonic stem cells from the inner cell mass by single-cell RNA-Seq analysis.
Tang F, Barbacioru C, Bao S, Lee C, Nordman E, Wang X, Lao K, Surani MA.
Cell Stem Cell. 2010 May 7;6(5):468-78.
Identification of an intermediate state as spermatogonial stem cells reprogram to multipotent cells.
Kim HJ, Lee HJ, Lim JJ, Kwak KH, Kim JS, Kim JH, Han YM, Kim KS, Lee DR.
Mol Cells. 2010 May;29(5):519-26.
EWS-FLI-1 modulates miRNA145 and SOX2 expression to initiate mesenchymal stem cell reprogramming toward Ewing sarcoma cancer
stem cells.
Riggi N, Suvà ML, De Vito C, Provero P, Stehle JC, Baumer K, Cironi L, Janiszewska M, Petricevic T, Suvà D, Tercier S, Joseph JM,
Guillou L, Stamenkovic I.
Genes Dev. 2010 May;24(9):916-32.
Stem cells and germ cells: microRNA and gene expression signatures.
Dyce PW, Toms D, Li J.
Histol Histopathol. 2010 Apr;25(4):505-13.
NF-kappaB activation stimulates osteogenic differentiation of mesenchymal stem cells derived from human adipose tissue by increasing
TAZ expression.
Cho HH, Shin KK, Kim YJ, Song JS, Kim JM, Bae YC, Kim CD, Jung JS.
J Cell Physiol. 2010 Apr;223(1):168-77.
SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human
embryonic cells.
Pantano L, Estivill X, Martí E.
Nucleic Acids Res. 2010 Mar 1;38(5):e34.
Comparative expression profiles of mRNAs and microRNAs among human mesenchymal stem cells derived from breast, face, and
abdominal adipose tissues.
Wang KH, Kao AP, Singh S, Yu SL, Kao LP, Tsai ZY, Lin SD, Li SS.
Kaohsiung J Med Sci. 2010 Mar;26(3):113-22.
Specific microRNA expression during chondrogenesis of human mesenchymal stem cells.
Han J, Yang T, Gao J, Wu J, Qiu X, Fan Q, Ma B.
Int J Mol Med. 2010 Mar;25(3):377-84.
Low-density Taqman miRNA array reveals miRNAs differentially expressed in prostatic stem cells and luminal cells.
Zhang L, Zhao W, Valdez JM, Creighton CJ, Xin L.
Prostate. 2010 Feb 15;70(3):297-304.
Analysis of deep sequencing microRNA expression profile from human embryonic stem cells derived mesenchymal stem cells reveals
possible role of let-7 microRNA family in downstream targeting of hepatic nuclear factor 4 alpha.
Koh W, Sheng CT, Tan B, Lee QY, Kuznetsov V, Kiang LS, Tanavde V.
BMC Genomics. 2010 Feb 10;11 Suppl 1:S6.
Opposing microRNA families regulate self-renewal in mouse embryonic stem cells.
Melton C, Judson RL, Blelloch R.
Nature. 2010 Feb 4;463(7281):621-6.
Stem cells: Big roles for small RNAs.
Slack FJ.
Nature. 2010 Feb 4;463(7281):616.
A genetic strategy for single and combinatorial analysis of miRNA function in mammalian hematopoietic stem cells.
Papapetrou EP, Korkola JE, Sadelain M.
Stem Cells. 2010 Feb;28(2):287-96.
MicroRNA-204 regulates Runx2 protein expression and mesenchymal progenitor cell differentiation.
Huang J, Zhao L, Xing L, Chen D.
Stem Cells. 2010 Feb;28(2):357-64.
More insight into mesenchymal stem cells and their effects inside the body.
Zou Z, Zhang Y, Hao L, Wang F, Liu D, Su Y, Sun H.
Expert Opin Biol Ther. 2010 Feb;10(2):215-30.
Identification of microRNAs regulated by activin A in human embryonic stem cells.
Tsai ZY, Singh S, Yu SL, Kao LP, Chen BZ, Ho BC, Yang PC, Li SS.
J Cell Biochem. 2010 Jan 1;109(1):93-102.
MicroRNA expression profiles in umbilical cord blood cell lineages.
Merkerova M, Vasikova A, Belickova M, Bruchova H.
Stem Cells Dev. 2010 Jan;19(1):17-26.
The genetics of induced pluripotency.
Ralston A, Rossant J.
Reproduction. 2010 Jan;139(1):35-44.
Paracrine/endocrine mechanism of stem cells on kidney repair: role of microvesicle-mediated transfer of genetic information.
Camussi G, Deregibus MC, Tetta C.
Curr Opin Nephrol Hypertens. 2010 Jan;19(1):7-12.
Mesenchymal stem cell secretes microparticles enriched in pre-microRNAs.
Chen TS, Lai RC, Lee MM, Choo AB, Lee CN, Lim SK.
Nucleic Acids Res. 2010 Jan;38(1):215-24.
A brief introduction to RNAi and microRNAs in stem cells.
Murashov AK.
Methods Mol Biol. 2010;650:15-25.
Assessing in vivo microRNA function in the germline stem cells of the Drosophila ovary.
Chan K, Ruohola-Baker H.
Methods Mol Biol. 2010;650:201-12.
Monitoring microRNA expression during embryonic stem-cell differentiation using quantitative real-time PCR (qRT-PCR).
Pan X, Murashov AK, Stellwag EJ, Zhang B.
Methods Mol Biol. 2010;650:213-24.
Engineering human mesenchymal stem cells to release adenosine using miRNA technology.
Ren G, Boison D.
Methods Mol Biol. 2010;650:225-40.
Epigenetic codes in stem cells and cancer stem cells.
Yamada Y, Watanabe A.
Adv Genet. 2010;70:177-99.
Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different
cell types.
Ji Z, Tian B.
PLoS One. 2009 Dec 23;4(12):e8419.
MiR-21 regulates adipogenic differentiation through the modulation of TGF-beta signaling in mesenchymal stem cells derived from human
adipose tissue.
Kim YJ, Hwang SJ, Bae YC, Jung JS.
Stem Cells. 2009 Dec;27(12):3093-102.
Myc's other life: stem cells and beyond.
Laurenti E, Wilson A, Trumpp A.
Curr Opin Cell Biol. 2009 Dec;21(6):844-54.
MicroRNA regulation of neuron-like differentiation of adipose tissue-derived stem cells.
Ning H, Huang YC, Banie L, Hung S, Lin G, Li LC, Lue TF, Lin CS.
Differentiation. 2009 Dec;78(5):253-9.
The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2.
Rybak A, Fuchs H, Hadian K, Smirnova L, Wulczyn EA, Michel G, Nitsch R, Krappmann D, Wulczyn FG.
Nat Cell Biol. 2009 Dec;11(12):1411-20.
TRIMming microRNA function in mouse stem cells.
Dueck A, Meister G.
Nat Cell Biol. 2009 Dec;11(12):1392-3.
Ischemic preconditioning augments survival of stem cells via miR-210 expression by targeting caspase-8-associated protein 2.
Won Kim H, Haider HK, Jiang S, Ashraf M.
J Biol Chem. 2009 Nov 27;284(48):33161-8.
microRNAs regulate human embryonic stem cell division.
Qi J, Yu JY, Shcherbata HR, Mathieu J, Wang AJ, Seal S, Zhou W, Stadler BM, Bourgin D, Wang L, Nelson A, Ware C, Raymond C, Lim
LP, Magnus J, Ivanovska I, Diaz R, Ball A, Cleary MA, Ruohola-Baker H.
Cell Cycle. 2009 Nov 15;8(22):3729-41.
Epigenetic signatures associated with different levels of differentiation potential in human stem cells.
Aranda P, Agirre X, Ballestar E, Andreu EJ, Román-Gómez J, Prieto I, Martín-Subero JI, Cigudosa JC, Siebert R, Esteller M, Prosper F.
PLoS One. 2009 Nov 13;4(11):e7809.
Myc-regulated microRNAs attenuate embryonic stem cell differentiation.
Lin CH, Jackson AL, Guo J, Linsley PS, Eisenman RN.
EMBO J. 2009 Oct 21;28(20):3157-70.
Have you seen...?: Micro-managing and restraining pluripotent stem cells by MYC.
Dang CV.
EMBO J. 2009 Oct 21;28(20):3065-6.
Mir-214-dependent regulation of the polycomb protein Ezh2 in skeletal muscle and embryonic stem cells.
Juan AH, Kumar RM, Marx JG, Young RA, Sartorelli V.
Mol Cell. 2009 Oct 9;36(1):61-74.
Micro-RNA mediated regulation of proliferation, self-renewal and differentiation of mammalian stem cells.
Hime GR, Somers WG.
Cell Adh Migr. 2009 Oct;3(4):425-32.
Concerted stimuli regulating osteo-chondral differentiation from stem cells: phenotype acquisition regulated by microRNAs.
Gordeladze JO, Djouad F, Brondello JM, Noël D, Duroux-Richard I, Apparailly F, Jorgensen C.
Acta Pharmacol Sin. 2009 Oct;30(10):1369-84.
Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors.
Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP.
PLoS One. 2009 Sep 28;4(9):e7192.
Members of the miR-290 cluster modulate in vitro differentiation of mouse embryonic stem cells.
Zovoilis A, Smorag L, Pantazi A, Engel W.
Differentiation. 2009 Sep-Oct;78(2-3):69-78.
Anticipating a next-generation census of stem-cell small RNA.
Franklin JB.
Yale J Biol Med. 2009 Sep;82(3):109-10.
Regulation of stem cell pluripotency and differentiation involves a mutual regulatory circuit of the NANOG, OCT4, and SOX2 pluripotency
transcription factors with polycomb repressive complexes and stem cell microRNAs.
Kashyap V, Rezende NC, Scotland KB, Shaffer SM, Persson JL, Gudas LJ, Mongan NP.
Stem Cells Dev. 2009 Sep;18(7):1093-108.
Embryonic stem cell microRNAs: defining factors in induced pluripotent (iPS) and cancer (CSC) stem cells?
Gunaratne PH.
Curr Stem Cell Res Ther. 2009 Sep;4(3):168-77.
Muscle stem cell behavior is modified by microRNA-27 regulation of Pax3 expression.
Crist CG, Montarras D, Pallafacchina G, Rocancourt D, Cumano A, Conway SJ, Buckingham M.
Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13383-7.
MicroRNAs and parallel stem cell lives.
Dirks PB.
Cell. 2009 Aug 7;138(3):423-4.
Downregulation of miRNA-200c links breast cancer stem cells with normal stem cells.
Shimono Y, Zabala M, Cho RW, Lobo N, Dalerba P, Qian D, Diehn M, Liu H, Panula SP, Chiao E, Dirbas FM, Somlo G, Pera RA, Lao K,
Clarke MF.
Cell. 2009 Aug 7;138(3):592-603.
Expression of miR-31, miR-125b-5p, and miR-326 in the adipogenic differentiation process of adipose-derived stem cells.
Tang YF, Zhang Y, Li XY, Li C, Tian W, Liu L.
OMICS. 2009 Aug;13(4):331-6.
MicroRNA-1 and MicroRNA-133 in spontaneous myocardial differentiation of mouse embryonic stem cells.
Takaya T, Ono K, Kawamura T, Takanabe R, Kaichi S, Morimoto T, Wada H, Kita T, Shimatsu A, Hasegawa K.
Circ J. 2009 Aug;73(8):1492-7.
Highly dynamic and sex-specific expression of microRNAs during early ES cell differentiation.
Ciaudo C, Servant N, Cognat V, Sarazin A, Kieffer E, Viville S, Colot V, Barillot E, Heard E, Voinnet O.
PLoS Genet. 2009 Aug;5(8):e1000620.
Regulation of 'stemness' and stem cell differentiation by microRNAs.
Sartipy P, Olsson B, Hyllner J, Synnergren J.
IDrugs. 2009 Aug;12(8):492-6.
Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation.
Kikuchi K, Fukuda M, Ito T, Inoue M, Yokoi T, Chiku S, Mitsuyama T, Asai K, Hirose T, Aizawa Y.
Nucleic Acids Res. 2009 Aug;37(15):4987-5000.
MicroRNA-23b cluster microRNAs regulate transforming growth factor-beta/bone morphogenetic protein signaling and liver stem cell
differentiation by targeting Smads.
Rogler CE, Levoci L, Ader T, Massimi A, Tchaikovskaya T, Norel R, Rogler LE.
Hepatology. 2009 Aug;50(2):575-84.
Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures.
Chin MH, Mason MJ, Xie W, Volinia S, Singer M, Peterson C, Ambartsumyan G, Aimiuwu O, Richter L, Zhang J, Khvorostov I, Ott V,
Grunstein M, Lavon N, Benvenisty N, Croce CM, Clark AT, Baxter T, Pyle AD, Teitell MA, Pelegrini M, Plath K, Lowry WE.
Cell Stem Cell. 2009 Jul 2;5(1):111-23.
MicroRNA 92b controls the G1/S checkpoint gene p57 in human embryonic stem cells.
Sengupta S, Nie J, Wagner RJ, Yang C, Stewart R, Thomson JA.
Stem Cells. 2009 Jul;27(7):1524-8.
Differential microRNA expression between bone marrow side population cells and hepatocytes in adult mice.
Nagata Y, Maesawa C, Tada H, Takikawa Y, Yashima-Abo A, Masuda T.
Int J Mol Med. 2009 Jul;24(1):35-43.
Hypoxia-inducible factor-1alpha in stem cell preconditioning: mechanistic role of hypoxia-related micro-RNAs.
Haider KH, Kim HW, Ashraf M.
J Thorac Cardiovasc Surg. 2009 Jul;138(1):257.
Turning cancer stem cells inside out: an exploration of glioma stem cell signaling pathways.
Li Z, Wang H, Eyler CE, Hjelmeland AB, Rich JN.
J Biol Chem. 2009 Jun 19;284(25):16705-9.
MicroRNA and stem cell regulation.
Wang Y, Russell I, Chen C.
Curr Opin Mol Ther. 2009 Jun;11(3):292-8.
MicroRNA profiling of human-induced pluripotent stem cells.
Wilson KD, Venkatasubrahmanyam S, Jia F, Sun N, Butte AJ, Wu JC.
Stem Cells Dev. 2009 Jun;18(5):749-58.
Cell cycle regulation by MicroRNAs in embryonic stem cells.
Wang Y, Blelloch R.
Cancer Res. 2009 May 15;69(10):4093-6.
MicroRNA-145 regulates OCT4, SOX2, and KLF4 and represses pluripotency in human embryonic stem cells.
Xu N, Papagiannakopoulos T, Pan G, Thomson JA, Kosik KS.
Cell. 2009 May 15;137(4):647-58.
Abate and switch: miR-145 in stem cell differentiation.
Chivukula RR, Mendell JT.
Cell. 2009 May 15;137(4):606-8.
Embryonic stem cells derived from somatic cloned and fertilized blastocysts are post-transcriptionally indistinguishable: a MicroRNA and
protein profile comparison.
Ding J, Guo Y, Liu S, Yan Y, Chang G, Kou Z, Zhang Y, Jiang Y, He F, Gao S, Sang J.
Proteomics. 2009 May;9(10):2711-21.
miR-196a regulates proliferation and osteogenic differentiation in mesenchymal stem cells derived from human adipose tissue.
Kim YJ, Bae SW, Yu SS, Bae YC, Jung JS.
J Bone Miner Res. 2009 May;24(5):816-25.
Dicer-1-dependent Dacapo suppression acts downstream of Insulin receptor in regulating cell division of Drosophila germline stem cells.
Yu JY, Reynolds SH, Hatfield SD, Shcherbata HR, Fischer KA, Ward EJ, Long D, Ding Y, Ruohola-Baker H.
Development. 2009 May;136(9):1497-507.
Embryonic stem cell-specific microRNAs promote induced pluripotency.
Judson RL, Babiarz JE, Venere M, Blelloch R.
Nat Biotechnol. 2009 May;27(5):459-61.
Target identification of microRNAs expressed highly in human embryonic stem cells.
Li SS, Yu SL, Kao LP, Tsai ZY, Singh S, Chen BZ, Ho BC, Liu YH, Yang PC.
J Cell Biochem. 2009 Apr 15;106(6):1020-30.
Molecules that promote or enhance reprogramming of somatic cells to induced pluripotent stem cells.
Feng B, Ng JH, Heng JC, Ng HH.
Cell Stem Cell. 2009 Apr 3;4(4):301-12.
A study of microRNAs in silico and in vivo: emerging regulators of embryonic stem cells.
Kim KS, Kim JS, Lee MR, Jeong HS, Kim J.
FEBS J. 2009 Apr;276(8):2140-9.
The bantam microRNA is associated with drosophila fragile X mental retardation protein and regulates the fate of germline stem cells.
Yang Y, Xu S, Xia L, Wang J, Wen S, Jin P, Chen D.
PLoS Genet. 2009 Apr;5(4):e1000444.
MicroRNA and gene expression patterns in the differentiation of human embryonic stem cells.
Ren J, Jin P, Wang E, Marincola FM, Stroncek DF.
J Transl Med. 2009 Mar 23;7:20.
Characterization of function and regulation of miR-24-1 and miR-31.
Sun F, Wang J, Pan Q, Yu Y, Zhang Y, Wan Y, Wang J, Li X, Hong A.
Biochem Biophys Res Commun. 2009 Mar 13;380(3):660-5.
Gene and microRNA expression signatures of human mesenchymal stromal cells in comparison to fibroblasts.
Bae S, Ahn JH, Park CW, Son HK, Kim KS, Lim NK, Jeon CJ, Kim H.
Cell Tissue Res. 2009 Mar;335(3):565-73.
Human embryonic stem cells and cardiac cell fate.
Nury D, Neri T, Pucéat M.
J Cell Physiol. 2009 Mar;218(3):455-9.
Is REST a regulator of pluripotency?
Buckley NJ, Johnson R, Sun YM, Stanton LW.
Nature. 2009 Feb 26;457(7233):E5-6
miR-17 family miRNAs are expressed during early mammalian development and regulate stem cell differentiation.
Foshay KM, Gallicano GI.
Dev Biol. 2009 Feb 15;326(2):431-43.
The miR-302-367 cluster as a potential stemness regulator in ESCs.
Barroso-del Jesus A, Lucena-Aguilar G, Menendez P.
Cell Cycle. 2009 Feb 1;8(3):394-8.
Stem cells by the shore: Meeting summary of the 2008 MDI Stem Cell Symposium.
Epstein JA, Niemitz EL.
Epigenetics. 2009 Feb;4(2):125-6.
[miRNAs play an essential role in stem cell self-renewal and differentiation]
An Y, An TZ, Teng CB.
Yi Chuan. 2009 Feb;31(2):115-22.
MicroRNAs: key regulators of stem cells.
Gangaraju VK, Lin H.
Nat Rev Mol Cell Biol. 2009 Feb;10(2):116-25.
MicroRNAs in embryonic stem cells.
Wang Y, Keys DN, Au-Young JK, Chen C.
J Cell Physiol. 2009 Feb;218(2):251-5.
Exposing hidden dimensions of embryonic stem cell cycle control.
Dalton S.
Cell Stem Cell. 2009 Jan 9;4(1):9-10.
MicroRNAs regulation modulated self-renewal and lineage differentiation of stem cells.
Liu SP, Fu RH, Yu HH, Li KW, Tsai CH, Shyu WC, Lin SZ.
Cell Transplant. 2009;18(9):1039-45.
Gene expression in stem cells.
Liang Y, Russell I, Walworth C, Chen C.
Crit Rev Eukaryot Gene Expr. 2009;19(4):289-300.
Diverse miRNA spatial expression patterns suggest important roles in homeostasis and regeneration in planarians.
González-Estévez C, Arseni V, Thambyrajah RS, Felix DA, Aboobaker AA.
Int J Dev Biol. 2009;53(4):493-505.
Functional profiling reveals critical role for miRNA in differentiation of human mesenchymal stem cells.
Schoolmeesters A, Eklund T, Leake D, Vermeulen A, Smith Q, Force Aldred S, Fedorov Y.
PLoS One. 2009;4(5):e5605.
Transfer of microRNAs by embryonic stem cell microvesicles.
Yuan A, Farber EL, Rapoport AL, Tejada D, Deniskin R, Akhmedov NB, Farber DB.
PLoS ONE. 2009;4(3):e4722.
HMGA2, microRNAs, and stem cell aging.
Hammond SM, Sharpless NE.
Cell. 2008 Dec 12;135(6):1013-6.
miR-302b maintains "stemness" of human embryonal carcinoma cells by post-transcriptional regulation of Cyclin D2 expression.
Lee NS, Kim JS, Cho WJ, Lee MR, Steiner R, Gompers A, Ling D, Zhang J, Strom P, Behlke M, Moon SH, Salvaterra PM, Jove R, Kim
KS.
Biochem Biophys Res Commun. 2008 Dec 12;377(2):434-40.
MicroRNA expression profile of bronchioalveolar stem cells from mouse lung.
Qian S, Ding JY, Xie R, An JH, Ao XJ, Zhao ZG, Sun JG, Duan YZ, Chen ZT, Zhu B.
Biochem Biophys Res Commun. 2008 Dec 12;377(2):668-73.
[Expression and function of microRNA in embryonic stem cell]
Wang SH, Bian CJ, Zhao CH.
Yi Chuan. 2008 Dec;30(12):1545-9.
MicroRNAs in embryonic stem cells and early embryonic development.
Laurent LC.
J Cell Mol Med. 2008 Dec;12(6A):2181-8.
Proliferative control in Drosophila stem cells.
Kohlmaier A, Edgar BA.
Curr Opin Cell Biol. 2008 Dec;20(6):699-706.
miRNAs, 'stemness' and skin.
Aberdam D, Candi E, Knight RA, Melino G.
Trends Biochem Sci. 2008 Dec;33(12):583-91.
Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation.
Wang Y, Baskerville S, Shenoy A, Babiarz JE, Baehner L, Blelloch R.
Nat Genet. 2008 Dec;40(12):1478-83.
Cell cycle micromanagement in embryonic stem cells.
Kim VN.
Nat Genet. 2008 Dec;40(12):1391-2.
Human multipotent stromal cells from bone marrow and microRNA: regulation of differentiation and leukemia inhibitory factor expression.
Oskowitz AZ, Lu J, Penfornis P, Ylostalo J, McBride J, Flemington EK, Prockop DJ, Pochampally R.
Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18372-7.
Ink4a/Arf regulation by let-7b and Hmga2: a genetic pathway governing stem cell aging.
Tzatsos A, Bardeesy N.
Cell Stem Cell. 2008 Nov 6;3(5):469-70.
Embryonic stem cell-specific miR302-367 cluster: human gene structure and functional characterization of its core promoter.
Barroso-delJesus A, Romero-López C, Lucena-Aguilar G, Melen GJ, Sanchez L, Ligero G, Berzal-Herranz A, Menendez P.
Mol Cell Biol. 2008 Nov;28(21):6609-19.
The mesenchymal stromal cell contribution to homeostasis.
Valtieri M, Sorrentino A.
J Cell Physiol. 2008 Nov;217(2):296-300.
MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation.
Tay Y, Zhang J, Thomson AM, Lim B, Rigoutsos I.
Nature. 2008 Oct 23;455(7216):1124-8.
Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs.
Babiarz JE, Ruby JG, Wang Y, Bartel DP, Blelloch R.
Genes Dev. 2008 Oct 15;22(20):2773-85.
MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries.
Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP,
Gentleman R, Ruohola-Baker H, Tewari M.
Stem Cells. 2008 Oct;26(10):2496-505.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ, Finnell RH, Sands AT, Zambrowicz BP, Abuin A.
Genome Res. 2008 Oct;18(10):1670-9.
Oct4/Sox2-regulated miR-302 targets cyclin D1 in human embryonic stem cells.
Card DA, Hebbar PB, Li L, Trotter KW, Komatsu Y, Mishina Y, Archer TK.
Mol Cell Biol. 2008 Oct;28(20):6426-38.
Mir-302 reprograms human skin cancer cells into a pluripotent ES-cell-like state.
Lin SL, Chang DC, Chang-Lin S, Lin CH, Wu DT, Chen DT, Ying SY.
RNA. 2008 Oct;14(10):2115-24.
let-7 microRNAs in development, stem cells and cancer.
Büssing I, Slack FJ, Grosshans H.
Trends Mol Med. 2008 Sep;14(9):400-9.
Multipotent adult germline stem cells and embryonic stem cells have similar microRNA profiles.
Zovoilis A, Nolte J, Drusenheimer N, Zechner U, Hada H, Guan K, Hasenfuss G, Nayernia K, Engel W.
Mol Hum Reprod. 2008 Sep;14(9):521-9.
Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells.
Marson A, Levine SS, Cole MF, Frampton GM, Brambrink T, Johnstone S, Guenther MG, Johnston WK, Wernig M, Newman J, Calabrese
JM, Dennis LM, Volkert TL, Gupta S, Love J, Hannett N, Sharp PA, Bartel DP, Jaenisch R, Young RA.
Cell. 2008 Aug 8;134(3):521-33.
[MicroRNA differential expression profile during differentiation of embryonic stem cells towards hepatocytes induced by sodium butyrate]
Chen YJ, Min J, Shang CZ, Ren M, Peng XX, Cao J, Chen JS.
Zhongguo Yi Xue Ke Xue Yuan Xue Bao. 2008 Aug;30(4):469-73.
Pluripotent human stem cell lines: what we can learn about cancer initiation.
Werbowetski-Ogilvie TE, Bhatia M.
Trends Mol Med. 2008 Aug;14(8):323-32.
Evolutionary emergence of microRNAs in human embryonic stem cells.
Cao H, Yang CS, Rana TM.
PLoS ONE. 2008 Jul 30;3(7):e2820.
Differentiation of two types of mobilized peripheral blood stem cells by microRNA and cDNA expression analysis.
Jin P, Wang E, Ren J, Childs R, Shin JW, Khuu H, Marincola FM, Stroncek DF.
J Transl Med. 2008 Jul 22;6:39.
Comparative transcriptomics of human multipotent stem cells during adipogenesis and osteoblastogenesis.
Scheideler M, Elabd C, Zaragosi LE, Chiellini C, Hackl H, Sanchez-Cabo F, Yadav S, Duszka K, Friedl G, Papak C, Prokesch A,
Windhager R, Ailhaud G, Dani C, Amri EZ, Trajanoski Z.
BMC Genomics. 2008 Jul 17;9:340.
Mei-P26 regulates microRNAs and cell growth in the Drosophila ovarian stem cell lineage.
Neumüller RA, Betschinger J, Fischer A, Bushati N, Poernbacher I, Mechtler K, Cohen SM, Knoblich JA.
Nature. 2008 Jul 10;454(7201):241-5.
Novel microRNA candidates and miRNA-mRNA pairs in embryonic stem (ES) cells.
Gu P, Reid JG, Gao X, Shaw CA, Creighton C, Tran PL, Zhou X, Drabek RB, Steffen DL, Hoang DM, Weiss MK, Naghavi AO, El-daye J,
Khan MF, Legge GB, Wheeler DA, Gibbs RA, Miller JN, Cooney AJ, Gunaratne PH.
PLoS ONE. 2008 Jul 2;3(7):e2548.
miR-203 represses 'stemness' by repressing DeltaNp63.
Lena AM, Shalom-Feuerstein R, di Val Cervo PR, Aberdam D, Knight RA, Melino G, Candi E.
Cell Death Differ. 2008 Jul;15(7):1187-95.
Stem cell self-renewal versus differentiation: tumor suppressor Mei-P26 and miRNAs control the balance.
Shen R, Xie T.
Cell Res. 2008 Jul;18(7):713-5.
MicroRNAs play a role in the development of human hematopoietic stem cells.
Liao R, Sun J, Zhang L, Lou G, Chen M, Zhou D, Chen Z, Zhang S.
J Cell Biochem. 2008 Jun 1;104(3):805-17.
Comprehensive microRNA profiling reveals a unique human embryonic stem cell signature dominated by a single seed sequence.
Laurent LC, Chen J, Ulitsky I, Mueller FJ, Lu C, Shamir R, Fan JB, Loring JF.
Stem Cells. 2008 Jun;26(6):1506-16.
The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians.
Palakodeti D, Smielewska M, Lu YC, Yeo GW, Graveley BR.
RNA. 2008 Jun;14(6):1174-86.
Replicative senescence of mesenchymal stem cells: a continuous and organized process.
Wagner W, Horn P, Castoldi M, Diehlmann A, Bork S, Saffrich R, Benes V, Blake J, Pfister S, Eckstein V, Ho AD.
PLoS ONE. 2008 May 21;3(5):e2213.
Immunostimulatory effects of mesenchymal stem cell-derived neurons: implications for stem cell therapy in allogeneic transplantations.
Castillo MD, Trzaska KA, Greco SJ, Ponzio NM, Rameshwar P.
Clin Transl Sci. 2008 May;1(1):27-34.
Molecular basis of pluripotency.
Chen L, Daley GQ.
Hum Mol Genet. 2008 Apr 15;17(R1):R23-7.
Multiple layers of molecular controls modulate self-renewal and neuronal lineage specification of embryonic stem cells.
Yeo GW, Coufal N, Aigner S, Winner B, Scolnick JA, Marchetto MC, Muotri AR, Carson C, Gage FH.
Hum Mol Genet. 2008 Apr 15;17(R1):R67-75.
Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells.
Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA.
Genome Res. 2008 Apr;18(4):610-21.
MicroRNA regulation of stem cell fate.
Li Q, Gregory RI.
Cell Stem Cell. 2008 Mar 6;2(3):195-6.
MicroRNA regulation of cell lineages in mouse and human embryonic stem cells.
Ivey KN, Muth A, Arnold J, King FW, Yeh RF, Fish JE, Hsiao EC, Schwartz RJ, Conklin BR, Bernstein HS, Srivastava D.
Cell Stem Cell. 2008 Mar 6;2(3):219-29.
MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells.
Sinkkonen L, Hugenschmidt T, Berninger P, Gaidatzis D, Mohn F, Artus-Revel CG, Zavolan M, Svoboda P, Filipowicz W.
Nat Struct Mol Biol. 2008 Mar;15(3):259-67.
Small RNAs: keeping stem cells in line.
Stadler BM, Ruohola-Baker H.
Cell. 2008 Feb 22;132(4):563-6.
Unraveling epigenetic regulation in embryonic stem cells.
Bibikova M, Laurent LC, Ren B, Loring JF, Fan JB.
Cell Stem Cell. 2008 Feb 7;2(2):123-34.
Osteogenic differentiation of human adipose tissue-derived stem cells is modulated by the miR-26a targeting of the SMAD1 transcription
factor.
Luzi E, Marini F, Sala SC, Tognarini I, Galli G, Brandi ML.
J Bone Miner Res. 2008 Feb;23(2):287-95.
Concise review: MicroRNA expression in multipotent mesenchymal stromal cells.
Lakshmipathy U, Hart RP.
Stem Cells. 2008 Feb;26(2):356-63.
Derivation, characterization, and in vitro differentiation of canine embryonic stem cells.
Hayes B, Fagerlie SR, Ramakrishnan A, Baran S, Harkey M, Graf L, Bar M, Bendoraite A, Tewari M, Torok-Storb B.
Stem Cells. 2008 Feb;26(2):465-73.
Do cells let-7 determine stemness?
Dröge P, Davey CA.
Cell Stem Cell. 2008 Jan 10;2(1):8-9.
Genomic studies to explore self-renewal and differentiation properties of embryonic stem cells.
Zhan M.
Front Biosci. 2008 Jan 1;13:276-83.
microRNA and stem cell function.
Hatfield S, Ruohola-Baker H.
Cell Tissue Res. 2008 Jan;331(1):57-66.
MicroRNA-134 modulates the differentiation of mouse embryonic stem cells, where it causes post-transcriptional attenuation of Nanog and
LRH1.
Tay YM, Tam WL, Ang YS, Gaughwin PM, Yang H, Wang W, Liu R, George J, Ng HH, Perera RJ, Lufkin T, Rigoutsos I, Thomson AM, Lim
B.
Stem Cells. 2008 Jan;26(1):17-29.
Small RNA silencing pathways in germ and stem cells.
Aravin AA, Hannon GJ.
Cold Spring Harb Symp Quant Biol. 2008;73:283-90.
MicroRNA expression patterns and function in endodermal differentiation of human embryonic stem cells.
Tzur G, Levy A, Meiri E, Barad O, Spector Y, Bentwich Z, Mizrahi L, Katzenellenbogen M, Ben-Shushan E, Reubinoff BE, Galun E.
PLoS ONE. 2008;3(11):e3726.
Stage-specific differences in the requirements for germline stem cell maintenance in the Drosophila ovary.
Shcherbata HR, Ward EJ, Fischer KA, Yu JY, Reynolds SH, Chen CH, Xu P, Hay BA, Ruohola-Baker H.
Cell Stem Cell. 2007 Dec 13;1(6):698-709.
Small RNAs, big potential: the role of MicroRNAs in stem cell function.
Foshay KM, Gallicano GI.
Curr Stem Cell Res Ther. 2007 Dec;2(4):264-71.
Argonaute 1 regulates the fate of germline stem cells in Drosophila.
Yang L, Chen D, Duan R, Xia L, Wang J, Qurashi A, Jin P, Chen D.
Development. 2007 Dec;134(23):4265-72.
MicroRNA expression pattern of undifferentiated and differentiated human embryonic stem cells.
Lakshmipathy U, Love B, Goff LA, Jörnsten R, Graichen R, Hart RP, Chesnut JD.
Stem Cells Dev. 2007 Dec;16(6):1003-16.
RNA sequence analysis defines Dicer's role in mouse embryonic stem cells.
Calabrese JM, Seila AC, Yeo GW, Sharp PA.
Proc Natl Acad Sci U S A. 2007 Nov 13;104(46):18097-102.
[Research advance of microRNA and stem cell]
Gao J, Yang T, Qiu X.
Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi. 2007 Sep;21(9):1007-10.
Embryonic stem cells: from bench to bedside.
Puceat M, Ballis A.
Clin Pharmacol Ther. 2007 Sep;82(3):337-9.
Integrative genomic and functional analyses reveal neuronal subtype differentiation bias in human embryonic stem cell lines.
Wu H, Xu J, Pang ZP, Ge W, Kim KJ, Blanchi B, Chen C, Sudhof TC, Sun YE.
Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13821-6.
Defining embryonic stem cell identity using differentiation-related microRNAs and their potential targets.
Chen C, Ridzon D, Lee CT, Blake J, Sun Y, Strauss WM.
Mamm Genome. 2007 May;18(5):316-27.
On the applicability of QSAR for recognition of miRNA bioorganic structures at early stages of organism and cell development: embryo and
stem cells.
Gonzalez-Diaz H, Vilar S, Santana L, Podda G, Uriarte E.
Bioorg Med Chem. 2007 Apr 1;15(7):2544-50.
Dcr-1 maintains Drosophila ovarian stem cells.
Jin Z, Xie T.
Curr Biol. 2007 Mar 20;17(6):539-44.
The miRNA pathway intrinsically controls self-renewal of Drosophila germline stem cells.
Park JK, Liu X, Strauss TJ, McKearin DM, Liu Q.
Curr Biol. 2007 Mar 20;17(6):533-8.
Micro-RNA's function to maintain stem cell phenotype.
[No authors listed]
Cancer Biol Ther. 2007 Mar;6(3):305.
DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal.
Wang Y, Medvid R, Melton C, Jaenisch R, Blelloch R.
Nat Genet. 2007 Mar;39(3):380-5.
A panel of tests to standardize the characterization of human embryonic stem cells.
Pal R, Mandal A, Rao HS, Rao MS, Khanna A.
Regen Med. 2007 Mar;2(2):179-92.
CD34+ hematopoietic stem-progenitor cell microRNA expression and function: a circuit diagram of differentiation control.
Georgantas RW 3rd, Hildreth R, Morisot S, Alder J, Liu CG, Heimfeld S, Calin GA, Croce CM, Civin CI.
Proc Natl Acad Sci U S A. 2007 Feb 20;104(8):2750-5.
Qualification of embryonal carcinoma 2102Ep as a reference for human embryonic stem cell research.
Josephson R, Ording CJ, Liu Y, Shin S, Lakshmipathy U, Toumadje A, Love B, Chesnut JD, Andrews PW, Rao MS, Auerbach JM.
Stem Cells. 2007 Feb;25(2):437-46.
Micro RNA profiling: an easy and rapid method to screen and characterize stem cell populations.
Lakshmipathy U, Love B, Adams C, Thyagarajan B, Chesnut JD.
Methods Mol Biol. 2007;407:97-114.
Characterization of the short RNAs bound by the P19 suppressor of RNA silencing in mouse embryonic stem cells.
Calabrese JM, Sharp PA.
RNA. 2006 Dec;12(12):2092-102.
MicroRNA: a new player in stem cells.
Zhang B, Pan X, Anderson TA.
J Cell Physiol. 2006 Nov;209(2):266-9.
Radiation-induced response of micro RNA expression in murine embryonic stem cells.
Ishii H, Saito T.
Med Chem. 2006 Nov;2(6):555-63.
MicroRNA expression profiling of single whole embryonic stem cells.
Tang F, Hajkova P, Barton SC, Lao K, Surani MA.
Nucleic Acids Res. 2006 Jan 24;34(2):e9.
The MicroRNA pathway plays a regulatory role in stem cell division.
Shcherbata HR, Hatfield S, Ward EJ, Reynolds S, Fischer KA, Ruohola-Baker H.
Cell Cycle. 2006 Jan;5(2):172-5.
Factors involved in self-renewal and pluripotency of embryonic stem cells.
Darr H, Benvenisty N.
Handb Exp Pharmacol. 2006;(174):1-19.
Gene silencing using RNA interference in embryonic stem cells.
Velkey JM, Slawny NA, Gratsch TE, O'Shea KS.
Methods Mol Biol. 2006;329:233-61.
Mouse embryonic stem cells as a model genetic system to dissect and exploit the RNA interference machinery.
Muljo SA, Kanellopoulou C.
Methods Mol Biol. 2006;342:57-72.
Core transcriptional regulatory circuitry in human embryonic stem cells.
Boyer LA, Lee TI, Cole MF, Johnstone SE, Levine SS, Zucker JP, Guenther MG, Kumar RM, Murray HL, Jenner RG, Gifford DK, Melton
DA, Jaenisch R, Young RA.
Cell. 2005 Sep 23;122(6):947-56.
Characterization of Dicer-deficient murine embryonic stem cells.
Murchison EP, Partridge JF, Tam OH, Cheloufi S, Hannon GJ.
Proc Natl Acad Sci U S A. 2005 Aug 23;102(34):12135-40.
Stem cell division is regulated by the microRNA pathway.
Hatfield SD, Shcherbata HR, Fischer KA, Nakahara K, Carthew RW, Ruohola-Baker H.
Nature. 2005 Jun 16;435(7044):974-8.
Stem cells: from epigenetics to microRNAs.
Cheng LC, Tavazoie M, Doetsch F.
Neuron. 2005 May 5;46(3):363-7.
Conserved and divergent paths that regulate self-renewal in mouse and human embryonic stem cells.
Rao M.
Dev Biol. 2004 Nov 15;275(2):269-86.
Human embryonic stem cells express a unique set of microRNAs.
Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS.
Dev Biol. 2004 Jun 15;270(2):488-98.
Embryonic stem cell-specific MicroRNAs.
Houbaviy HB, Murray MF, Sharp PA.
Dev Cell. 2003 Aug;5(2):351-8.