Plant

A miRNA involved in phosphate-starvation response in Arabidopsis.
Fujii H, Chiou TJ, Lin SI, Aung K, Zhu JK.
Curr Biol. 2005 Nov 22;15(22):2038-43.

Ectopic DICER-LIKE1 expression in P1/HC-Pro Arabidopsis rescues phenotypic anomalies but not defects in microRNA and silencing
pathways.
Mlotshwa S, Schauer SE, Smith TH, Mallory AC, Herr JM Jr, Roth B, Merchant DS, Ray A, Bowman LH, Vance VB.
Plant Cell. 2005 Nov;17(11):2873-85.

RNA silencing platforms in plants.
Watson JM, Fusaro AF, Wang M, Waterhouse PM.
FEBS Lett. 2005 Oct 31;579(26):5982-7.

MicroRNA biogenesis and function in plants.
Chen X.
FEBS Lett. 2005 Oct 31;579(26):5923-31.

Pathways through the small RNA world of plants.
Herr AJ.
FEBS Lett. 2005 Oct 31;579(26):5879-88.

Suppressors of RNA silencing encoded by plant viruses and their role in viral infections.
Qu F, Morris TJ.
FEBS Lett. 2005 Oct 31;579(26):5958-64.

SERRATE coordinates shoot meristem function and leaf axial patterning in Arabidopsis.
Grigg SP, Canales C, Hay A, Tsiantis M.
Nature. 2005 Oct 13;437(7061):1022-6.

Time to grow up: the temporal role of smallRNAs in plants.
Willmann MR, Poethig RS.
Curr Opin Plant Biol. 2005 Oct;8(5):548-52.

Computational detection of microRNAs targeting transcription factor genes in Arabidopsis thaliana.
Li X, Zhang YZ.
Comput Biol Chem. 2005 Oct;29(5):360-7.

Extensive 3' modification of plant small RNAs is modulated by helper component-proteinase expression.
Ebhardt HA, Thi EP, Wang MB, Unrau PJ.
Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13398-403.

A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis.
Yoshikawa M, Peragine A, Park MY, Poethig RS.
Genes Dev. 2005 Sep 15;19(18):2164-75.

Computational evidence for hundreds of non-conserved plant microRNAs.
Lindow M, Krogh A.
BMC Genomics. 2005 Sep 13;6:119.

A plant RNA virus suppresses RNA silencing through viral RNA replication.
Takeda A, Tsukuda M, Mizumoto H, Okamoto K, Kaido M, Mise K, Okuno T.
EMBO J. 2005 Sep 7;24(17):3147-57.

Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice.
Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X.
Plant Physiol. 2005 Sep;139(1):296-305.

Cloning and characterization of micro-RNAs from moss.
Arazi T, Talmor-Neiman M, Stav R, Riese M, Huijser P, Baulcombe DC.
Plant J. 2005 Sep;43(6):837-48.

Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.
Li J, Yang Z, Yu B, Liu J, Chen X.
Curr Biol. 2005 Aug 23;15(16):1501-7.

Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs.
Baumberger N, Baulcombe DC.
Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11928-33.

Biochemical specialization within Arabidopsis RNA silencing pathways.
Qi Y, Denli AM, Hannon GJ.
Mol Cell. 2005 Aug 5;19(3):421-8.

Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis.
Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL.
Plant Cell. 2005 Aug;17(8):2186-203.

Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis.
Wang JW, Wang LJ, Mao YB, Cai WJ, Xue HW, Chen XY.
Plant Cell. 2005 Aug;17(8):2204-16.

Regulation of Arabidopsis shoot apical meristem and lateral organ formation by microRNA miR166g and its AtHD-ZIP target genes.
Williams L, Grigg SP, Xie M, Christensen S, Fletcher JC.
Development. 2005 Aug;132(16):3657-68.

Expression of Arabidopsis MIRNA genes.
Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC.
Plant Physiol. 2005 Aug;138(4):2145-54.

Molecular evolution of the rice miR395 gene family.
Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L.
Cell Res. 2005 Aug;15(8):631-8.

MicroRNA-binding viral protein interferes with Arabidopsis development.
Chellappan P, Vanitharani R, Fauquet CM.
Proc Natl Acad Sci U S A. 2005 Jul 19;102(29):10381-6.

miRU: an automated plant miRNA target prediction server.
Zhang Y.
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W701-4.

microRNA172 down-regulates glossy15 to promote vegetative phase change in maize.
Lauter N, Kampani A, Carlson S, Goebel M, Moose SP.
Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9412-7.

Antiquity of microRNAs and their targets in land plants.
Axtell MJ, Bartel DP.
Plant Cell. 2005 Jun;17(6):1658-73.

Small RNAs and Arabidopsis. A fast forward look.
Carrington JC.
Plant Physiol. 2005 Jun;138(2):565-6.

Identification and characterization of new plant microRNAs using EST analysis.
Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA.
Cell Res. 2005 May;15(5):336-60.

Cloning and characterization of microRNAs from rice.
Sunkar R, Girke T, Jain PK, Zhu JK.
Plant Cell. 2005 May;17(5):1397-411.

MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates
expression of early auxin response genes.
Mallory AC, Bartel DP, Bartel B.
Plant Cell. 2005 May;17(5):1360-75.

MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development.
Guo HS, Xie Q, Fei JF, Chua NH.
Plant Cell. 2005 May;17(5):1376-86.

microRNA-directed phasing during trans-acting siRNA biogenesis in plants.
Allen E, Xie Z, Gustafson AM, Carrington JC.
Cell. 2005 Apr 22;121(2):207-21.

The role of ARGONAUTE1 (AGO1) in meristem formation and identity.
Kidner CA, Martienssen RA.
Dev Biol. 2005 Apr 15;280(2):504-17.

microRNA-directed cleavage of ATHB15 mRNA regulates vascular development in Arabidopsis inflorescence stems.
Kim J, Jung JH, Reyes JL, Kim YS, Kim SY, Chung KS, Kim JA, Lee M, Lee Y, Narry Kim V, Chua NH, Park CM.
Plant J. 2005 Apr;42(1):84-94.

Specific effects of microRNAs on the plant transcriptome.
Schwab R, Palatnik JF, Riester M, Schommer C, Schmid M, Weigel D.
Dev Cell. 2005 Apr;8(4):517-27.

Nuclear processing and export of microRNAs in Arabidopsis.
Park MY, Wu G, Gonzalez-Sulser A, Vaucheret H, Poethig RS.
Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3691-6.

The Arabidopsis GAMYB-like genes, MYB33 and MYB65, are microRNA-regulated genes that redundantly facilitate anther development.
Millar AA, Gubler F.
Plant Cell. 2005 Mar;17(3):705-21.

The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.
Baker CC, Sieber P, Wellmer F, Meyerowitz EM.
Curr Biol. 2005 Feb 22;15(4):303-15.

Methylation as a crucial step in plant microRNA biogenesis.
Yu B, Yang Z, Li J, Minakhina S, Yang M, Padgett RW, Steward R, Chen X.
Science. 2005 Feb 11;307(5711):932-5.

The developmental role of microRNA in plants.
Kidner CA, Martienssen RA.
Curr Opin Plant Biol. 2005 Feb;8(1):38-44.

Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa.
Li Y, Li W, Jin YX.
Acta Biochim Biophys Sin (Shanghai). 2005 Feb;37(2):75-87.

ASRP: the Arabidopsis Small RNA Project Database.
Gustafson AM, Allen E, Givan S, Smith D, Carrington JC, Kasschau KD.
Nucleic Acids Res. 2005 Jan 1;33(Database issue):D637-40.

Computational prediction of miRNAs in Arabidopsis thaliana.
Adai A, Johnson C, Mlotshwa S, Archer-Evans S, Manocha V, Vance V, Sundaresan V.
Genome Res. 2005 Jan;15(1):78-91.

[Research advances on the mechanism of RNA silencing in plants]
Zhao QZ, Zhao SY, Xia GM.
Yi Chuan Xue Bao. 2005 Jan;32(1):104-10.

Plant microRNAs and development.
Jover-Gil S, Candela H, Ponce MR.
Int J Dev Biol. 2005;49(5-6):733-44.

Regulated RNA processing in the control of Arabidopsis flowering.
Quesada V, Dean C, Simpson GG.
Int J Dev Biol. 2005;49(5-6):773-80.